RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 VEGFBP49765 207 aa25.23■■□□□ 1.63
SFXN1-203ENST00000502393 EXOSC9Q06265 439 aaKnown RBP25.23■■□□□ 1.63
SFXN1-203ENST00000502393 TTLL11Q8NHH1 800 aa25.23■■□□□ 1.63
SFXN1-203ENST00000502393 ZC3H15Q8WU90 426 aaKnown RBP25.23■■□□□ 1.63
SFXN1-203ENST00000502393 CDC5LQ99459 802 aaKnown RBP25.23■■□□□ 1.63
SFXN1-203ENST00000502393 GGA1Q9UJY5 639 aa25.23■■□□□ 1.63
SFXN1-203ENST00000502393 H7C1W4 665 aa25.22■■□□□ 1.63
SFXN1-203ENST00000502393 UFL1O94874 794 aa25.22■■□□□ 1.63
SFXN1-203ENST00000502393 FKBP5Q13451 457 aaPredicted RBP25.22■■□□□ 1.63
SFXN1-203ENST00000502393 DOK7Q18PE1 504 aa25.22■■□□□ 1.63
SFXN1-203ENST00000502393 DEFB115Q30KQ5 88 aa25.22■■□□□ 1.63
SFXN1-203ENST00000502393 COL13A1Q5TAT6 717 aaPredicted RBP25.22■■□□□ 1.63
SFXN1-203ENST00000502393 RPS12P25398 132 aaKnown RBP25.21■■□□□ 1.63
SFXN1-203ENST00000502393 MICALL2Q8IY33 904 aa25.21■■□□□ 1.63
SFXN1-203ENST00000502393 DNAAF4Q8WXU2 420 aa25.21■■□□□ 1.63
SFXN1-203ENST00000502393 GPR101Q96P66 508 aaPredicted RBP25.21■■□□□ 1.63
SFXN1-203ENST00000502393 ABT1Q9ULW3 272 aaKnown RBP25.21■■□□□ 1.63
SFXN1-203ENST00000502393 ZBTB12Q9Y330 459 aaPredicted RBP25.21■■□□□ 1.63
SFXN1-203ENST00000502393 RTL9Q8NET4 1388 aa25.2■■□□□ 1.63
SFXN1-203ENST00000502393 XDHP47989 1333 aa25.2■■□□□ 1.62
SFXN1-203ENST00000502393 HIRAP54198 1017 aaPredicted RBP25.2■■□□□ 1.62
SFXN1-203ENST00000502393 FMR1Q06787 632 aaKnown RBP eCLIP25.2■■□□□ 1.62
SFXN1-203ENST00000502393 GCKRQ14397 625 aa25.2■■□□□ 1.62
SFXN1-203ENST00000502393 UBE3BQ7Z3V4 1068 aa25.2■■□□□ 1.62
SFXN1-203ENST00000502393 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
SFXN1-203ENST00000502393 G3V3G9 751 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 TRAF5O00463 557 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 DCAF8Q5TAQ9 597 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 LINS1Q8NG48 757 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 TRPM4Q8TD43 1214 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 GREM2Q9H772 168 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 SPINK5Q9NQ38 1064 aaPredicted RBP25.19■■□□□ 1.62
SFXN1-203ENST00000502393 KCNQ5Q9NR82 932 aa25.19■■□□□ 1.62
SFXN1-203ENST00000502393 CACNA1FO60840 1977 aa25.18■■□□□ 1.62
SFXN1-203ENST00000502393 CST9Q5W186 159 aa25.18■■□□□ 1.62
SFXN1-203ENST00000502393 PLA2G12BQ9BX93 195 aa25.18■■□□□ 1.62
SFXN1-203ENST00000502393 BSDC1Q9NW68 430 aaPredicted RBP25.18■■□□□ 1.62
SFXN1-203ENST00000502393 SHTN1A0MZ66 631 aa25.17■■□□□ 1.62
SFXN1-203ENST00000502393 ATP2B4P23634 1241 aa25.17■■□□□ 1.62
SFXN1-203ENST00000502393 MYH3P11055 1940 aa25.16■■□□□ 1.62
SFXN1-203ENST00000502393 VIL1P09327 827 aaKnown RBP25.16■■□□□ 1.62
SFXN1-203ENST00000502393 MINPP1Q9UNW1 487 aa25.16■■□□□ 1.62
SFXN1-203ENST00000502393 WDR33Q9C0J8 1336 aaKnown RBP25.15■■□□□ 1.62
SFXN1-203ENST00000502393 CASP7P55210 303 aa25.15■■□□□ 1.62
SFXN1-203ENST00000502393 CDC37L1Q7L3B6 337 aa25.15■■□□□ 1.62
SFXN1-203ENST00000502393 GLIS2Q9BZE0 524 aaPredicted RBP25.15■■□□□ 1.62
SFXN1-203ENST00000502393 TRPM7Q96QT4 1865 aa25.15■■□□□ 1.62
SFXN1-203ENST00000502393 SAMD7Q7Z3H4 446 aa25.14■■□□□ 1.62
SFXN1-203ENST00000502393 TLL2Q9Y6L7 1015 aa25.14■■□□□ 1.62
SFXN1-203ENST00000502393 CELF2O95319 508 aaKnown RBP25.12■■□□□ 1.61
SFXN1-203ENST00000502393 CSF1RP07333 972 aa25.12■■□□□ 1.61
SFXN1-203ENST00000502393 IGHMBP2P38935 993 aaKnown RBP25.12■■□□□ 1.61
SFXN1-203ENST00000502393 PODNQ7Z5L7 613 aa25.12■■□□□ 1.61
SFXN1-203ENST00000502393 AIDAQ96BJ3 306 aa25.12■■□□□ 1.61
SFXN1-203ENST00000502393 WBP1LQ9NX94 342 aa25.12■■□□□ 1.61
SFXN1-203ENST00000502393 ITGA6P23229 1130 aa25.11■■□□□ 1.61
SFXN1-203ENST00000502393 ECE1P42892 770 aa25.11■■□□□ 1.61
SFXN1-203ENST00000502393 TBC1D10BQ4KMP7 808 aaPredicted RBP25.11■■□□□ 1.61
SFXN1-203ENST00000502393 MED23Q9ULK4 1368 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 FOXN1O15353 648 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 EGFRP00533 1210 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 CCT4P50991 539 aaKnown RBP25.1■■□□□ 1.61
SFXN1-203ENST00000502393 BEND3Q5T5X7 828 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 RSBN1LQ6PCB5 846 aaPredicted RBP25.1■■□□□ 1.61
SFXN1-203ENST00000502393 TNS4Q8IZW8 715 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 AGBL3Q8NEM8 1001 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 SCN9AQ15858 1988 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 ZNF609O15014 1411 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 ZNF521Q96K83 1311 aa25.1■■□□□ 1.61
SFXN1-203ENST00000502393 F6X3S4 739 aa25.09■■□□□ 1.61
SFXN1-203ENST00000502393 MAP2K1Q02750 393 aaPredicted RBP25.09■■□□□ 1.61
SFXN1-203ENST00000502393 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
SFXN1-203ENST00000502393 RBM26Q5T8P6 1007 aaKnown RBP25.09■■□□□ 1.61
SFXN1-203ENST00000502393 PAXIP1Q6ZW49 1069 aaPredicted RBP25.09■■□□□ 1.61
SFXN1-203ENST00000502393 SAPCD2Q86UD0 394 aa25.09■■□□□ 1.61
SFXN1-203ENST00000502393 USP48Q86UV5 1035 aa25.09■■□□□ 1.61
SFXN1-203ENST00000502393 CAPNS2Q96L46 248 aa25.09■■□□□ 1.61
SFXN1-203ENST00000502393 LEMD3Q9Y2U8 911 aa25.09■■□□□ 1.61
SFXN1-203ENST00000502393 WTIPA6NIX2 430 aaPredicted RBP25.08■■□□□ 1.61
SFXN1-203ENST00000502393 CTCFP49711 727 aaPredicted RBP25.08■■□□□ 1.61
SFXN1-203ENST00000502393 HHIPL1Q96JK4 782 aa25.08■■□□□ 1.61
SFXN1-203ENST00000502393 MPHOSPH8Q99549 860 aa25.08■■□□□ 1.61
SFXN1-203ENST00000502393 USP17L3A6NCW0 530 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 USP17L4A6NCW7 530 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 ZNF280AP59817 542 aaPredicted RBP25.07■■□□□ 1.6
SFXN1-203ENST00000502393 KIF4BQ2VIQ3 1234 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 CYP4F22Q6NT55 531 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 USP17L1Q7RTZ2 530 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 DCPSQ96C86 337 aaKnown RBP25.07■■□□□ 1.6
SFXN1-203ENST00000502393 ANKRD2Q9GZV1 360 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 ZNF408Q9H9D4 720 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 SPEF2Q9C093 1822 aa25.07■■□□□ 1.6
SFXN1-203ENST00000502393 KRT26Q7Z3Y9 468 aa25.06■■□□□ 1.6
SFXN1-203ENST00000502393 ANKRD18BA2A2Z9 1011 aa25.05■■□□□ 1.6
SFXN1-203ENST00000502393 FOXO4P98177 505 aa25.05■■□□□ 1.6
SFXN1-203ENST00000502393 GMLQ99445 158 aa25.05■■□□□ 1.6
SFXN1-203ENST00000502393 COA1Q9GZY4 146 aa25.05■■□□□ 1.6
SFXN1-203ENST00000502393 PRDM10Q9NQV6 1147 aa25.05■■□□□ 1.6
SFXN1-203ENST00000502393 PSME4Q14997 1843 aa25.05■■□□□ 1.6
SFXN1-203ENST00000502393 THSD7BQ9C0I4 1608 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms