RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SBF1O95248 1867 aa16.82■□□□□ 0.28
CPNE1-227ENST00000498056 ZNF609O15014 1411 aa16.81■□□□□ 0.28
CPNE1-227ENST00000498056 CHD4Q14839 1912 aa16.81■□□□□ 0.28
CPNE1-227ENST00000498056 EYA2O00167 538 aa16.81■□□□□ 0.28
CPNE1-227ENST00000498056 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.288e-10■□□□□ 11
CPNE1-227ENST00000498056 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
CPNE1-227ENST00000498056 ERICH6BQ5W0A0 696 aa16.81■□□□□ 0.28
CPNE1-227ENST00000498056 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
CPNE1-227ENST00000498056 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
CPNE1-227ENST00000498056 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-227ENST00000498056 BCS1LQ9Y276 419 aa16.81■□□□□ 0.28
CPNE1-227ENST00000498056 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 BBOX1O75936 387 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 CIAO1O76071 339 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 OLFM4Q6UX06 510 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 BCL11AQ9H165 835 aa16.8■□□□□ 0.28
CPNE1-227ENST00000498056 TMX4Q9H1E5 349 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-227ENST00000498056 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-227ENST00000498056 IL15P40933 162 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-227ENST00000498056 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
CPNE1-227ENST00000498056 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
CPNE1-227ENST00000498056 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
CPNE1-227ENST00000498056 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
CPNE1-227ENST00000498056 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
CPNE1-227ENST00000498056 MROH5Q6ZUA9 1318 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 PSME4Q14997 1843 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 C21orf2O43822 256 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 IGHDP01880 384 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 CHRNDQ07001 517 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 ATG9AQ7Z3C6 839 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
CPNE1-227ENST00000498056 XDHP47989 1333 aa16.77■□□□□ 0.28
CPNE1-227ENST00000498056 GOLGB1Q14789 3259 aaKnown RBP16.77■□□□□ 0.28
CPNE1-227ENST00000498056 CCDC93Q567U6 631 aa16.77■□□□□ 0.28
CPNE1-227ENST00000498056 HELBQ8NG08 1087 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-227ENST00000498056 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.28
CPNE1-227ENST00000498056 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.28
CPNE1-227ENST00000498056 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.28
CPNE1-227ENST00000498056 SNED1Q8TER0 1413 aa16.77■□□□□ 0.27
CPNE1-227ENST00000498056 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
CPNE1-227ENST00000498056 TAF5LO75529 589 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 KCNJ4P48050 445 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 GPSM2P81274 684 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 TFCP2Q12800 502 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 DCTPP1Q9H773 170 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
CPNE1-227ENST00000498056 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
CPNE1-227ENST00000498056 UFL1O94874 794 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-227ENST00000498056 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 KIF1BPQ96EK5 621 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 CEP126Q9P2H0 1117 aa16.75■□□□□ 0.27
CPNE1-227ENST00000498056 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-227ENST00000498056 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-227ENST00000498056 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-227ENST00000498056 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
CPNE1-227ENST00000498056 SASH1O94885 1247 aa16.74■□□□□ 0.27
CPNE1-227ENST00000498056 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
CPNE1-227ENST00000498056 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-227ENST00000498056 VGLL2Q8N8G2 317 aa16.74■□□□□ 0.27
CPNE1-227ENST00000498056 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
CPNE1-227ENST00000498056 MYH7P12883 1935 aa16.74■□□□□ 0.27
CPNE1-227ENST00000498056 KDM2BQ8NHM5 1336 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 PDE8BO95263 885 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 CC2D2BQ6DHV5 1058 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 MPNDQ8N594 471 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 C7orf43Q8WVR3 580 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-227ENST00000498056 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-227ENST00000498056 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
CPNE1-227ENST00000498056 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
CPNE1-227ENST00000498056 MYO5AQ9Y4I1 1855 aaKnown RBP16.72■□□□□ 0.27
CPNE1-227ENST00000498056 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
CPNE1-227ENST00000498056 YBX3P16989 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
CPNE1-227ENST00000498056 ZNF804BA4D1E1 1349 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 SNAP23O00161 211 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 SLC5A1P13866 664 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 RASSF7Q02833 373 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 GPR162Q16538 588 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 ANKRD45Q5TZF3 282 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 AACSQ86V21 672 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 RTKN2Q8IZC4 609 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 CLASRPQ8N2M8 674 aaKnown RBP16.71■□□□□ 0.27
CPNE1-227ENST00000498056 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
CPNE1-227ENST00000498056 MAST2Q6P0Q8 1798 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms