RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 EYA2O00167 538 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 KDM4AO75164 1064 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 CEP126Q9P2H0 1117 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 H3BQV1 296 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 PIGBQ92521 554 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 KCNB2Q92953 911 aa13.69□□□□□ -0.22
CDCA7-208ENST00000496441 CRYBG1Q9Y4K1 1723 aa13.68□□□□□ -0.22
CDCA7-208ENST00000496441 HLFQ16534 295 aa13.68□□□□□ -0.22
CDCA7-208ENST00000496441 ANKRD1Q15327 319 aa13.68□□□□□ -0.22
CDCA7-208ENST00000496441 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
CDCA7-208ENST00000496441 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
CDCA7-208ENST00000496441 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
CDCA7-208ENST00000496441 LIG1P18858 919 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 IL15P40933 162 aaPredicted RBP13.67□□□□□ -0.22
CDCA7-208ENST00000496441 KRT85P78386 507 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 SCARF1Q14162 830 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 TTC39AQ5SRH9 613 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 CCDC191Q8NCU4 936 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 ADAMTS7Q9UKP4 1686 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDCA7-208ENST00000496441 HMG20BQ9P0W2 317 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 CPDO75976 1380 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 HELBQ8NG08 1087 aaPredicted RBP13.67□□□□□ -0.22
CDCA7-208ENST00000496441 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
CDCA7-208ENST00000496441 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
CDCA7-208ENST00000496441 M0R2C6 588 aa13.66□□□□□ -0.22
CDCA7-208ENST00000496441 SCRN1Q12765 414 aa13.66□□□□□ -0.22
CDCA7-208ENST00000496441 XAGE2Q96GT9 111 aa13.66□□□□□ -0.22
CDCA7-208ENST00000496441 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
CDCA7-208ENST00000496441 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
CDCA7-208ENST00000496441 COL5A2P05997 1499 aaPredicted RBP13.66□□□□□ -0.22
CDCA7-208ENST00000496441 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
CDCA7-208ENST00000496441 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 KRT32Q14532 448 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 C17orf53Q8N3J3 647 aaPredicted RBP13.65□□□□□ -0.22
CDCA7-208ENST00000496441 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
CDCA7-208ENST00000496441 MAST3O60307 1309 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 SNAP23O00161 211 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 ADCY5O95622 1261 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 PDCP20941 246 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 IFIT5Q13325 482 aaKnown RBP13.65□□□□□ -0.22
CDCA7-208ENST00000496441 CCDC158Q5M9N0 1113 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 SPC24Q8NBT2 197 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 DACT1Q9NYF0 836 aa13.65□□□□□ -0.22
CDCA7-208ENST00000496441 ZAP70P43403 619 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 METTL24Q5JXM2 366 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 LDHAL6AQ6ZMR3 332 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 DCCP43146 1447 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 USPL1Q5W0Q7 1092 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 GREM2Q9H772 168 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
CDCA7-208ENST00000496441 CNNM1Q9NRU3 951 aa13.64□□□□□ -0.23
CDCA7-208ENST00000496441 E7EWF7 191 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
CDCA7-208ENST00000496441 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
CDCA7-208ENST00000496441 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
CDCA7-208ENST00000496441 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
CDCA7-208ENST00000496441 MRC1P22897 1456 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 STARD3NLO95772 234 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 APPP05067 770 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
CDCA7-208ENST00000496441 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 ZBTB1Q9Y2K1 713 aa13.63□□□□□ -0.23
CDCA7-208ENST00000496441 A0A087WWV3 80 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 ADAMTS2O95450 1211 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 ITGA6P23229 1130 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
CDCA7-208ENST00000496441 PUS7LQ9H0K6 701 aaKnown RBP13.62□□□□□ -0.23
CDCA7-208ENST00000496441 CCDC39Q9UFE4 941 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 ZKSCAN5Q9Y2L8 839 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 IDH1O75874 414 aaKnown RBP13.62□□□□□ -0.23
CDCA7-208ENST00000496441 ZMYM1Q5SVZ6 1142 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 GJB4Q9NTQ9 266 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDCA7-208ENST00000496441 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
CDCA7-208ENST00000496441 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
CDCA7-208ENST00000496441 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 NR1I2O75469 434 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
CDCA7-208ENST00000496441 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
CDCA7-208ENST00000496441 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 TNMDQ9H2S6 317 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 LUZP1Q86V48 1076 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 SLC4A9Q96Q91 983 aa13.61□□□□□ -0.23
CDCA7-208ENST00000496441 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms