RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 GLB1P16278 677 aa7.62□□□□□ -1.19
CLK1-214ENST00000496205 TREML1Q86YW5 311 aa7.62□□□□□ -1.19
CLK1-214ENST00000496205 RAXQ9Y2V3 346 aa7.62□□□□□ -1.19
CLK1-214ENST00000496205 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
CLK1-214ENST00000496205 FMNL2Q96PY5 1086 aa7.61□□□□□ -1.19
CLK1-214ENST00000496205 OAS3Q9Y6K5 1087 aaKnown RBP7.61□□□□□ -1.19
CLK1-214ENST00000496205 PAX4O43316 350 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 ADAMTS4O75173 837 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 GHRHP01286 108 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 IGLV1-40P01703 118 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 HOXD8P13378 290 aaPredicted RBP7.6□□□□□ -1.19
CLK1-214ENST00000496205 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.6□□□□□ -1.19
CLK1-214ENST00000496205 ARMC10Q8N2F6 343 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 VTI1AQ96AJ9 217 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
CLK1-214ENST00000496205 SRA1Q9HD15 236 aaKnown RBP7.6□□□□□ -1.19
CLK1-214ENST00000496205 KIAA1324LA8MWY0 1029 aaPredicted RBP7.59□□□□□ -1.19
CLK1-214ENST00000496205 WISP1O95388 367 aa7.59□□□□□ -1.19
CLK1-214ENST00000496205 SOX18P35713 384 aa7.59□□□□□ -1.19
CLK1-214ENST00000496205 IRAK1P51617 712 aa7.59□□□□□ -1.19
CLK1-214ENST00000496205 COX20Q5RI15 118 aa7.59□□□□□ -1.19
CLK1-214ENST00000496205 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
CLK1-214ENST00000496205 STOML1Q9UBI4 398 aa7.59□□□□□ -1.19
CLK1-214ENST00000496205 TM4SF5O14894 197 aa7.58□□□□□ -1.2
CLK1-214ENST00000496205 TAL1P17542 331 aaPredicted RBP7.58□□□□□ -1.2
CLK1-214ENST00000496205 LMOD1P29536 600 aaPredicted RBP7.58□□□□□ -1.2
CLK1-214ENST00000496205 KCNK4Q9NYG8 393 aa7.58□□□□□ -1.2
CLK1-214ENST00000496205 PPME1Q9Y570 386 aa7.58□□□□□ -1.2
CLK1-214ENST00000496205 LINC01387J3KSC0 135 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 PTCD1O75127 700 aaKnown RBP7.57□□□□□ -1.2
CLK1-214ENST00000496205 COBLO75128 1261 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 TXKP42681 527 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 GP2P55259 537 aaKnown RBP7.57□□□□□ -1.2
CLK1-214ENST00000496205 TRIP4Q15650 581 aaPredicted RBP7.57□□□□□ -1.2
CLK1-214ENST00000496205 FAM26DQ5JW98 314 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 COL13A1Q5TAT6 717 aaPredicted RBP7.57□□□□□ -1.2
CLK1-214ENST00000496205 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 ADAMTSL4Q6UY14 1074 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 PROSER2Q86WR7 435 aaPredicted RBP7.57□□□□□ -1.2
CLK1-214ENST00000496205 ZDHHC13Q8IUH4 622 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 ETFBKMTQ8IXQ9 262 aa7.57□□□□□ -1.2
CLK1-214ENST00000496205 GSC2O15499 205 aa7.56□□□□□ -1.2
CLK1-214ENST00000496205 FKBP5Q13451 457 aaPredicted RBP7.56□□□□□ -1.2
CLK1-214ENST00000496205 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
CLK1-214ENST00000496205 RBSNQ9H1K0 784 aa7.56□□□□□ -1.2
CLK1-214ENST00000496205 ATP11AP98196 1134 aa7.55□□□□□ -1.2
CLK1-214ENST00000496205 NLRP13Q86W25 1043 aa7.55□□□□□ -1.2
CLK1-214ENST00000496205 SAP130Q9H0E3 1048 aa7.55□□□□□ -1.2
CLK1-214ENST00000496205 DHX15O43143 795 aaKnown RBP7.54□□□□□ -1.2
CLK1-214ENST00000496205 CD68P34810 354 aaPredicted RBP7.54□□□□□ -1.2
CLK1-214ENST00000496205 NFIAQ12857 509 aa7.54□□□□□ -1.2
CLK1-214ENST00000496205 TRIM42Q8IWZ5 723 aa7.54□□□□□ -1.2
CLK1-214ENST00000496205 DCAF11Q8TEB1 546 aa7.54□□□□□ -1.2
CLK1-214ENST00000496205 LACRTQ9GZZ8 138 aa7.54□□□□□ -1.2
CLK1-214ENST00000496205 MUC3BQ9H195 1237 aa7.54□□□□□ -1.2
CLK1-214ENST00000496205 HMX2A2RU54 273 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 SPINK2P20155 84 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 CDC25BP30305 580 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 ACAD11Q709F0 780 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 ERICH6Q7L0X2 663 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 OR13H1Q8NG92 308 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 FAM200AQ8TCP9 573 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
CLK1-214ENST00000496205 PRIMPOLQ96LW4 560 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
CLK1-214ENST00000496205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.29e-11■■■■■ 86.5
CLK1-214ENST00000496205 CDCA8Q53HL2 280 aa7.52□□□□□ -1.21
CLK1-214ENST00000496205 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
CLK1-214ENST00000496205 SUPT5HO00267 1087 aaKnown RBP7.51□□□□□ -1.21
CLK1-214ENST00000496205 DDX3YO15523 660 aaKnown RBP7.51□□□□□ -1.21
CLK1-214ENST00000496205 RNF43Q68DV7 783 aa7.51□□□□□ -1.21
CLK1-214ENST00000496205 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
CLK1-214ENST00000496205 CEP41Q9BYV8 373 aa7.51□□□□□ -1.21
CLK1-214ENST00000496205 RASSF4Q9H2L5 321 aa7.51□□□□□ -1.21
CLK1-214ENST00000496205 UBAP1LF5GYI3 381 aa7.5□□□□□ -1.21
CLK1-214ENST00000496205 CDC27P30260 824 aa7.5□□□□□ -1.21
CLK1-214ENST00000496205 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
CLK1-214ENST00000496205 CAPN12Q6ZSI9 719 aa7.5□□□□□ -1.21
CLK1-214ENST00000496205 RNF114Q9Y508 228 aa7.5□□□□□ -1.21
CLK1-214ENST00000496205 A6NJR5 290 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 FSCN2O14926 492 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 ADAM11O75078 769 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 YBX3P16989 372 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLK1-214ENST00000496205 HYAL2Q12891 473 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 INTS5Q6P9B9 1019 aaKnown RBP7.49□□□□□ -1.21
CLK1-214ENST00000496205 DTX1Q86Y01 620 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 FOXD4L4Q8WXT5 416 aaPredicted RBP7.49□□□□□ -1.21
CLK1-214ENST00000496205 MYRFLQ96LU7 910 aa7.49□□□□□ -1.21
CLK1-214ENST00000496205 SH2B1Q9NRF2 756 aaPredicted RBP7.49□□□□□ -1.21
CLK1-214ENST00000496205 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 PRMT3O60678 531 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 EPHA1P21709 976 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
CLK1-214ENST00000496205 OCLNQ16625 522 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 DUOXA2Q1HG44 320 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms