RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TSC1Q92574 1164 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 ACSBG1Q96GR2 724 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 MAP10Q9P2G4 905 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 LIMD1Q9UGP4 676 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
RAB11FIP3-211ENST00000495663 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
RAB11FIP3-211ENST00000495663 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-211ENST00000495663 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
RAB11FIP3-211ENST00000495663 MRC1P22897 1456 aa13.24□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TRIM37O94972 964 aa13.24□□□□□ -0.29
RAB11FIP3-211ENST00000495663 CEMIPQ8WUJ3 1361 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 KCNQ2O43526 872 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 BMP1P13497 986 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 CABP4P57796 275 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TEFQ10587 303 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 QPCTQ16769 361 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 MCM10Q7L590 875 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
RAB11FIP3-211ENST00000495663 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
RAB11FIP3-211ENST00000495663 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
RAB11FIP3-211ENST00000495663 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
RAB11FIP3-211ENST00000495663 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 SENP3-EIF4A1A0A087X0R7 540 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 LCE2AQ5TA79 106 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 SENP2Q9HC62 589 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 RGPD3A6NKT7 1758 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 RGPD4Q7Z3J3 1758 aa13.21□□□□□ -0.29
RAB11FIP3-211ENST00000495663 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-211ENST00000495663 PIGBQ92521 554 aa13.2□□□□□ -0.3
RAB11FIP3-211ENST00000495663 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
RAB11FIP3-211ENST00000495663 LY75O60449 1722 aa13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 CAPN5O15484 640 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 WFS1O76024 890 aa13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 F12P00748 615 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 PTF1AQ7RTS3 328 aa13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-211ENST00000495663 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
RAB11FIP3-211ENST00000495663 APBA3O96018 575 aa13.18□□□□□ -0.3
RAB11FIP3-211ENST00000495663 VARSP26640 1264 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-211ENST00000495663 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP3-211ENST00000495663 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
RAB11FIP3-211ENST00000495663 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
RAB11FIP3-211ENST00000495663 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
RAB11FIP3-211ENST00000495663 BAG6P46379 1132 aa13.17□□□□□ -0.3
RAB11FIP3-211ENST00000495663 SMARCC1Q92922 1105 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-211ENST00000495663 HNRNPUQ00839 825 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAB11FIP3-211ENST00000495663 TRIM46Q7Z4K8 759 aa13.16□□□□□ -0.3
RAB11FIP3-211ENST00000495663 ZNF831Q5JPB2 1677 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 PLSCR1O15162 318 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 NNTQ13423 1086 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 WDR63Q8IWG1 891 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 ASAP1Q9ULH1 1129 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
RAB11FIP3-211ENST00000495663 RREB1Q92766 1687 aa13.15□□□□□ -0.31
RAB11FIP3-211ENST00000495663 GNAI1P63096 354 aa13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 ZNF790Q6PG37 636 aa13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-211ENST00000495663 IL16Q14005 1332 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 LILRB3O75022 631 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 AGERQ15109 404 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
RAB11FIP3-211ENST00000495663 C5P01031 1676 aa13.12□□□□□ -0.31
RAB11FIP3-211ENST00000495663 CHL1O00533 1208 aa13.12□□□□□ -0.31
RAB11FIP3-211ENST00000495663 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
RAB11FIP3-211ENST00000495663 FAM174AQ8TBP5 190 aa13.12□□□□□ -0.31
RAB11FIP3-211ENST00000495663 TJP1Q07157 1748 aa13.12□□□□□ -0.31
RAB11FIP3-211ENST00000495663 COL5A3P25940 1745 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 NUP188Q5SRE5 1749 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 SIK1P57059 783 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms