RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ADAMTS2O95450 1211 aa15.81■□□□□ 0.12
GPC1-209ENST00000495100 MCMDC2Q4G0Z9 681 aa15.81■□□□□ 0.12
GPC1-209ENST00000495100 KCNQ4P56696 695 aa15.8■□□□□ 0.12
GPC1-209ENST00000495100 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
GPC1-209ENST00000495100 KLF18A0A0U1RQI7 1052 aa15.8■□□□□ 0.12
GPC1-209ENST00000495100 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
GPC1-209ENST00000495100 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
GPC1-209ENST00000495100 PLEKHG1Q9ULL1 1385 aa15.8■□□□□ 0.12
GPC1-209ENST00000495100 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
GPC1-209ENST00000495100 CYP27B1O15528 508 aa15.79■□□□□ 0.12
GPC1-209ENST00000495100 LEO1Q8WVC0 666 aaPredicted RBP15.79■□□□□ 0.12
GPC1-209ENST00000495100 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
GPC1-209ENST00000495100 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
GPC1-209ENST00000495100 KIF24Q5T7B8 1368 aa15.79■□□□□ 0.12
GPC1-209ENST00000495100 NAA30Q147X3 362 aaPredicted RBP15.79■□□□□ 0.12
GPC1-209ENST00000495100 SIRT1Q96EB6 747 aa15.79■□□□□ 0.12
GPC1-209ENST00000495100 DLC1Q96QB1 1528 aa15.79■□□□□ 0.12
GPC1-209ENST00000495100 TAF5LO75529 589 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 TTC14Q96N46 770 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 CBX8Q9HC52 389 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 MINDY4BA8MYZ0 360 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 NECTIN1Q15223 517 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 ORC3Q9UBD5 711 aaPredicted RBP15.78■□□□□ 0.12
GPC1-209ENST00000495100 TRMT112Q9UI30 125 aaKnown RBP15.78■□□□□ 0.12
GPC1-209ENST00000495100 PHKG2P15735 406 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 PTPN12Q05209 780 aaKnown RBP15.78■□□□□ 0.12
GPC1-209ENST00000495100 PHKBQ93100 1093 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 AIFM3Q96NN9 605 aa15.78■□□□□ 0.12
GPC1-209ENST00000495100 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
GPC1-209ENST00000495100 MAP4K1Q92918 833 aa15.77■□□□□ 0.12
GPC1-209ENST00000495100 C8orf76Q96K31 380 aa15.77■□□□□ 0.12
GPC1-209ENST00000495100 AOPEPQ8N6M6 819 aa15.77■□□□□ 0.12
GPC1-209ENST00000495100 MIGA1Q8NAN2 632 aa15.77■□□□□ 0.12
GPC1-209ENST00000495100 KIF3AQ9Y496 699 aa15.77■□□□□ 0.12
GPC1-209ENST00000495100 RPAP1Q9BWH6 1393 aaPredicted RBP15.77■□□□□ 0.11
GPC1-209ENST00000495100 SALL3Q9BXA9 1300 aa15.77■□□□□ 0.11
GPC1-209ENST00000495100 LMOD1P29536 600 aaPredicted RBP15.77■□□□□ 0.11
GPC1-209ENST00000495100 SCRN1Q12765 414 aa15.77■□□□□ 0.11
GPC1-209ENST00000495100 IFIT5Q13325 482 aaKnown RBP15.77■□□□□ 0.11
GPC1-209ENST00000495100 SMIM5Q71RC9 77 aa15.77■□□□□ 0.11
GPC1-209ENST00000495100 PPP4R3BQ5MIZ7 849 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 USP28Q96RU2 1077 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.76■□□□□ 0.11
GPC1-209ENST00000495100 ZAP70P43403 619 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 SLC9C2Q5TAH2 1124 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
GPC1-209ENST00000495100 DENND2AQ9ULE3 1009 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 TNNT1P13805 278 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 FAM200AQ8TCP9 573 aa15.76■□□□□ 0.11
GPC1-209ENST00000495100 AP5Z1O43299 807 aa15.75■□□□□ 0.11
GPC1-209ENST00000495100 TOB2Q14106 344 aaPredicted RBP15.75■□□□□ 0.11
GPC1-209ENST00000495100 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
GPC1-209ENST00000495100 LETM1O95202 739 aaPredicted RBP15.75■□□□□ 0.11
GPC1-209ENST00000495100 KLHL10Q6JEL2 608 aa15.75■□□□□ 0.11
GPC1-209ENST00000495100 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
GPC1-209ENST00000495100 CDK11BP21127 795 aaKnown RBP15.74■□□□□ 0.11
GPC1-209ENST00000495100 ASAP1Q9ULH1 1129 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 ZNF213O14771 459 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 GOLGA8FQ08AF8 430 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 GOLGA8DPQ0D2H9 430 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 ST3GAL1Q11201 340 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 CFAP45Q9UL16 551 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 ERBB3P21860 1342 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 IMMTQ16891 758 aaKnown RBP15.74■□□□□ 0.11
GPC1-209ENST00000495100 VPS37DQ86XT2 251 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
GPC1-209ENST00000495100 KRT32Q14532 448 aa15.73■□□□□ 0.11
GPC1-209ENST00000495100 RASSF8Q8NHQ8 419 aa15.73■□□□□ 0.11
GPC1-209ENST00000495100 KDRP35968 1356 aa15.73■□□□□ 0.11
GPC1-209ENST00000495100 RIOK3O14730 519 aaKnown RBP15.73■□□□□ 0.11
GPC1-209ENST00000495100 PRC1O43663 620 aa15.73■□□□□ 0.11
GPC1-209ENST00000495100 ADD1P35611 737 aaKnown RBP15.73■□□□□ 0.11
GPC1-209ENST00000495100 MAPK8IP2Q13387 824 aaPredicted RBP15.73■□□□□ 0.11
GPC1-209ENST00000495100 C19orf44Q9H6X5 657 aa15.73■□□□□ 0.11
GPC1-209ENST00000495100 TRIM29Q14134 588 aa15.73■□□□□ 0.11
GPC1-209ENST00000495100 B4E1Z4 1266 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 STOX1Q6ZVD7 989 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 RAD21O60216 631 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 SERPINC1P01008 464 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 DHX32Q7L7V1 743 aaKnown RBP15.72■□□□□ 0.11
GPC1-209ENST00000495100 CPLX3Q8WVH0 158 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 PKNOX2Q96KN3 472 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 E7EWF7 191 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 TDO2P48775 406 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 SCARF1Q14162 830 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 XAGE2Q96GT9 111 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 PDCL3Q9H2J4 239 aa15.72■□□□□ 0.11
GPC1-209ENST00000495100 PRDM1O75626 825 aa15.71■□□□□ 0.11
GPC1-209ENST00000495100 PDIA6Q15084 440 aa15.71■□□□□ 0.11
GPC1-209ENST00000495100 C11orf57Q6ZUT1 292 aaPredicted RBP15.71■□□□□ 0.11
GPC1-209ENST00000495100 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms