RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
SRRM1-218ENST00000494934 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.61□□□□□ -1.03
SRRM1-218ENST00000494934 MMP20O60882 483 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
SRRM1-218ENST00000494934 SIN3BO75182 1162 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 PDE12Q6L8Q7 609 aaKnown RBP8.6□□□□□ -1.03
SRRM1-218ENST00000494934 OXCT2Q9BYC2 517 aaPredicted RBP8.6□□□□□ -1.03
SRRM1-218ENST00000494934 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 CHRDQ9H2X0 955 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 CNTN3Q9P232 1028 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
SRRM1-218ENST00000494934 NEURL1BA8MQ27 555 aa8.59□□□□□ -1.03
SRRM1-218ENST00000494934 CYP2E1P05181 493 aaPredicted RBP8.59□□□□□ -1.03
SRRM1-218ENST00000494934 ZC3H6P61129 1189 aaKnown RBP8.59□□□□□ -1.03
SRRM1-218ENST00000494934 ZNF385CQ66K41 422 aaPredicted RBP8.59□□□□□ -1.03
SRRM1-218ENST00000494934 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
SRRM1-218ENST00000494934 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
SRRM1-218ENST00000494934 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
SRRM1-218ENST00000494934 PRR12Q9ULL5 1215 aa8.59□□□□□ -1.03
SRRM1-218ENST00000494934 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
SRRM1-218ENST00000494934 RARAP10276 462 aa8.58□□□□□ -1.04
SRRM1-218ENST00000494934 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.58□□□□□ -1.04
SRRM1-218ENST00000494934 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
SRRM1-218ENST00000494934 EPS8L3Q8TE67 593 aaKnown RBP8.58□□□□□ -1.04
SRRM1-218ENST00000494934 TLR7Q9NYK1 1049 aaKnown RBP8.58□□□□□ -1.04
SRRM1-218ENST00000494934 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
SRRM1-218ENST00000494934 AK5Q9Y6K8 562 aa8.58□□□□□ -1.04
SRRM1-218ENST00000494934 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-218ENST00000494934 CELA2BP08218 269 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-218ENST00000494934 HOXD8P13378 290 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-218ENST00000494934 ADH6P28332 368 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 COL13A1Q5TAT6 717 aaPredicted RBP8.57□□□□□ -1.04
SRRM1-218ENST00000494934 SLCO4C1Q6ZQN7 724 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 DHX32Q7L7V1 743 aaKnown RBP8.57□□□□□ -1.04
SRRM1-218ENST00000494934 NT5DC4Q86YG4 428 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 C1orf127Q8N9H9 656 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 OR13H1Q8NG92 308 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 CCDC74AQ96AQ1 378 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 CRELD1Q96HD1 420 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 ZFYVE28Q9HCC9 887 aa8.57□□□□□ -1.04
SRRM1-218ENST00000494934 NSFL1CQ9UNZ2 370 aaKnown RBP8.57□□□□□ -1.04
SRRM1-218ENST00000494934 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
SRRM1-218ENST00000494934 TTC16Q8NEE8 873 aa8.56□□□□□ -1.04
SRRM1-218ENST00000494934 TRPM4Q8TD43 1214 aa8.56□□□□□ -1.04
SRRM1-218ENST00000494934 NPHS2Q9NP85 383 aa8.56□□□□□ -1.04
SRRM1-218ENST00000494934 ABI2Q9NYB9 513 aaPredicted RBP8.56□□□□□ -1.04
SRRM1-218ENST00000494934 OIP5O43482 229 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 PHACTR2O75167 634 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 EPXP11678 715 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-218ENST00000494934 ZNF76P36508 570 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 GOLGA6L1Q8N7Z2 621 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 SREK1Q8WXA9 508 aaKnown RBP8.55□□□□□ -1.04
SRRM1-218ENST00000494934 PNMA5Q96PV4 448 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
SRRM1-218ENST00000494934 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
SRRM1-218ENST00000494934 GDF2Q9UK05 429 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-218ENST00000494934 NAGPAQ9UK23 515 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 STARD13Q9Y3M8 1113 aa8.55□□□□□ -1.04
SRRM1-218ENST00000494934 EREGO14944 169 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 NEFLP07196 543 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 BCRP11274 1271 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 SOX18P35713 384 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 RNF34Q969K3 372 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 C12orf49Q9H741 205 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
SRRM1-218ENST00000494934 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
SRRM1-218ENST00000494934 GPLD1P80108 840 aa8.53□□□□□ -1.04
SRRM1-218ENST00000494934 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
SRRM1-218ENST00000494934 TINF2Q9BSI4 451 aa8.53□□□□□ -1.04
SRRM1-218ENST00000494934 LRRC4BQ9NT99 713 aa8.53□□□□□ -1.04
SRRM1-218ENST00000494934 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-218ENST00000494934 ELOA3DA6NLF2 546 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-218ENST00000494934 KIF4AO95239 1232 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 ADH7P40394 386 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 NRLP54845 237 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 MLLT1Q03111 559 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-218ENST00000494934 ELOA3BQ3SY89 546 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 GALNT6Q8NCL4 622 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 ELOA3Q8NG57 546 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 FRMD6Q96NE9 622 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 SALL4Q9UJQ4 1053 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 SLC6A14Q9UN76 642 aa8.52□□□□□ -1.05
SRRM1-218ENST00000494934 ITGAEP38570 1179 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 PLAURQ03405 335 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 NEUROD1Q13562 356 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 TTC39BQ5VTQ0 682 aaPredicted RBP8.51□□□□□ -1.05
SRRM1-218ENST00000494934 GALNT12Q8IXK2 581 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 UBE2OQ9C0C9 1292 aaKnown RBP8.51□□□□□ -1.05
SRRM1-218ENST00000494934 IGFLR1Q9H665 355 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 LATS2Q9NRM7 1088 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
SRRM1-218ENST00000494934 J3QW42 95 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms