RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
HDLBP-245ENST00000494862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDLBP-245ENST00000494862 HAUS7Q99871 368 aa13.94□□□□□ -0.18
HDLBP-245ENST00000494862 TBC1D2Q9BYX2 928 aa13.94□□□□□ -0.18
HDLBP-245ENST00000494862 NYXQ9GZU5 481 aa13.94□□□□□ -0.18
HDLBP-245ENST00000494862 DIAPH3Q9NSV4 1193 aa13.94□□□□□ -0.18
HDLBP-245ENST00000494862 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
HDLBP-245ENST00000494862 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 RFC4P35249 363 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 RABEP1Q15276 862 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 SETDB2Q96T68 719 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
HDLBP-245ENST00000494862 TAF1LQ8IZX4 1826 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 SF3B3Q15393 1217 aaKnown RBP13.92□□□□□ -0.18
HDLBP-245ENST00000494862 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 BICDL1Q6ZP65 573 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 HSCBQ8IWL3 235 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 LRP5O75197 1615 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 MYH3P11055 1940 aa13.92□□□□□ -0.18
HDLBP-245ENST00000494862 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 CWC27Q6UX04 472 aaKnown RBP13.91□□□□□ -0.18
HDLBP-245ENST00000494862 KIAA1211Q6ZU35 1233 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 XAGE2Q96GT9 111 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 LAMB2P55268 1798 aa13.91□□□□□ -0.18
HDLBP-245ENST00000494862 RAD50Q92878 1312 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 PDE8BO95263 885 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 SSFA2P28290 1259 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 GTF2E1P29083 439 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-245ENST00000494862 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
HDLBP-245ENST00000494862 ANAPC15P60006 121 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 TXNRD1Q16881 649 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 CDC5LQ99459 802 aaKnown RBP13.9□□□□□ -0.18
HDLBP-245ENST00000494862 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
HDLBP-245ENST00000494862 IL25Q9H293 177 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 SNRKQ9NRH2 765 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 ABCC12Q96J65 1359 aa13.9□□□□□ -0.18
HDLBP-245ENST00000494862 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
HDLBP-245ENST00000494862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
HDLBP-245ENST00000494862 PLSCR1O15162 318 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 PHF14O94880 888 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 IFIT1P09914 478 aaKnown RBP13.89□□□□□ -0.19
HDLBP-245ENST00000494862 ADORA1P30542 326 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 NMIQ13287 307 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-245ENST00000494862 TTC39AQ5SRH9 613 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 TPTE2Q6XPS3 522 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-245ENST00000494862 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
HDLBP-245ENST00000494862 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
HDLBP-245ENST00000494862 COL24A1Q17RW2 1714 aa13.88□□□□□ -0.19
HDLBP-245ENST00000494862 PROM2Q8N271 834 aa13.88□□□□□ -0.19
HDLBP-245ENST00000494862 EDC3Q96F86 508 aaKnown RBP13.88□□□□□ -0.19
HDLBP-245ENST00000494862 ZNF512BQ96KM6 892 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-245ENST00000494862 PAG1Q9NWQ8 432 aa13.88□□□□□ -0.19
HDLBP-245ENST00000494862 FGFR2P21802 821 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 HSPA4P34932 840 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 NFIXQ14938 502 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 PUM3Q15397 648 aaKnown RBP13.87□□□□□ -0.19
HDLBP-245ENST00000494862 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 LPIN2Q92539 896 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 NLRP3Q96P20 1036 aa13.87□□□□□ -0.19
HDLBP-245ENST00000494862 CARMIL3Q8ND23 1372 aa13.86□□□□□ -0.19
HDLBP-245ENST00000494862 GOLIM4O00461 696 aa13.86□□□□□ -0.19
HDLBP-245ENST00000494862 APBA3O96018 575 aa13.86□□□□□ -0.19
HDLBP-245ENST00000494862 SLC5A1P13866 664 aa13.86□□□□□ -0.19
HDLBP-245ENST00000494862 DDX46Q7L014 1031 aaKnown RBP13.86□□□□□ -0.19
HDLBP-245ENST00000494862 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
HDLBP-245ENST00000494862 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
HDLBP-245ENST00000494862 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 C4AP0C0L4 1744 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 A0A0D9SFI3 127 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 LRRFIP1Q32MZ4 808 aaKnown RBP13.85□□□□□ -0.19
HDLBP-245ENST00000494862 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-245ENST00000494862 PALD1Q9ULE6 856 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 CCDC171Q6TFL3 1326 aa13.85□□□□□ -0.19
HDLBP-245ENST00000494862 K7ELQ4 463 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-245ENST00000494862 ST18O60284 1047 aa13.84□□□□□ -0.19
HDLBP-245ENST00000494862 GYS1P13807 737 aa13.84□□□□□ -0.19
HDLBP-245ENST00000494862 PTH1RQ03431 593 aa13.84□□□□□ -0.19
HDLBP-245ENST00000494862 KCNB2Q92953 911 aa13.84□□□□□ -0.19
HDLBP-245ENST00000494862 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-245ENST00000494862 SPEF2Q9C093 1822 aa13.84□□□□□ -0.19
HDLBP-245ENST00000494862 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
HDLBP-245ENST00000494862 RNF113AO15541 343 aaKnown RBP13.83□□□□□ -0.2
HDLBP-245ENST00000494862 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms