RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 CDC5LQ99459 802 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-206ENST00000494262 MKRN1Q9UHC7 482 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-206ENST00000494262 GGA1Q9UJY5 639 aa28.46■■■□□ 2.15
CDKN2A-206ENST00000494262 LINS1Q8NG48 757 aa28.45■■■□□ 2.14
CDKN2A-206ENST00000494262 ZC3H12CQ9C0D7 883 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-206ENST00000494262 GREM2Q9H772 168 aa28.45■■■□□ 2.14
CDKN2A-206ENST00000494262 MYH3P11055 1940 aa28.45■■■□□ 2.14
CDKN2A-206ENST00000494262 ZNF521Q96K83 1311 aa28.44■■■□□ 2.14
CDKN2A-206ENST00000494262 ECE2O60344 883 aa28.44■■■□□ 2.14
CDKN2A-206ENST00000494262 RTL9Q8NET4 1388 aa28.42■■■□□ 2.14
CDKN2A-206ENST00000494262 PSMD14O00487 310 aa28.42■■■□□ 2.14
CDKN2A-206ENST00000494262 ZBTB12Q9Y330 459 aaPredicted RBP28.42■■■□□ 2.14
CDKN2A-206ENST00000494262 XDHP47989 1333 aa28.42■■■□□ 2.14
CDKN2A-206ENST00000494262 F6X3S4 739 aa28.41■■■□□ 2.14
CDKN2A-206ENST00000494262 CNOT7Q9UIV1 285 aaKnown RBP28.41■■■□□ 2.14
CDKN2A-206ENST00000494262 CNTNAP1P78357 1384 aa28.4■■■□□ 2.14
CDKN2A-206ENST00000494262 G3V3G9 751 aa28.4■■■□□ 2.14
CDKN2A-206ENST00000494262 CASP7P55210 303 aa28.4■■■□□ 2.14
CDKN2A-206ENST00000494262 DCAF8Q5TAQ9 597 aa28.4■■■□□ 2.14
CDKN2A-206ENST00000494262 PLA2G12BQ9BX93 195 aa28.4■■■□□ 2.14
CDKN2A-206ENST00000494262 KCNQ5Q9NR82 932 aa28.4■■■□□ 2.14
CDKN2A-206ENST00000494262 SHTN1A0MZ66 631 aa28.39■■■□□ 2.14
CDKN2A-206ENST00000494262 BSDC1Q9NW68 430 aaPredicted RBP28.39■■■□□ 2.14
CDKN2A-206ENST00000494262 H7C1D1 291 aa28.38■■■□□ 2.13
CDKN2A-206ENST00000494262 ATP2B4P23634 1241 aa28.38■■■□□ 2.13
CDKN2A-206ENST00000494262 MICALL2Q8IY33 904 aa28.38■■■□□ 2.13
CDKN2A-206ENST00000494262 TRPM4Q8TD43 1214 aa28.38■■■□□ 2.13
CDKN2A-206ENST00000494262 SPEF2Q9C093 1822 aa28.38■■■□□ 2.13
CDKN2A-206ENST00000494262 FMR1Q06787 632 aaKnown RBP eCLIP28.37■■■□□ 2.13
CDKN2A-206ENST00000494262 BEND3Q5T5X7 828 aa28.37■■■□□ 2.13
CDKN2A-206ENST00000494262 DPF2Q92785 391 aa28.37■■■□□ 2.13
CDKN2A-206ENST00000494262 MINPP1Q9UNW1 487 aa28.37■■■□□ 2.13
CDKN2A-206ENST00000494262 TRAF5O00463 557 aa28.36■■■□□ 2.13
CDKN2A-206ENST00000494262 IGHMBP2P38935 993 aaKnown RBP28.36■■■□□ 2.13
CDKN2A-206ENST00000494262 HIRAP54198 1017 aaPredicted RBP28.36■■■□□ 2.13
CDKN2A-206ENST00000494262 FAM161AQ3B820 660 aa28.36■■■□□ 2.13
CDKN2A-206ENST00000494262 ITGA6P23229 1130 aa28.35■■■□□ 2.13
CDKN2A-206ENST00000494262 RPS12P25398 132 aaKnown RBP28.35■■■□□ 2.13
CDKN2A-206ENST00000494262 ABT1Q9ULW3 272 aaKnown RBP28.35■■■□□ 2.13
CDKN2A-206ENST00000494262 CSF1RP07333 972 aa28.34■■■□□ 2.13
CDKN2A-206ENST00000494262 HSPA1AP0DMV8 641 aaKnown RBP28.34■■■□□ 2.13
CDKN2A-206ENST00000494262 HSPA1BP0DMV9 641 aaKnown RBP28.34■■■□□ 2.13
CDKN2A-206ENST00000494262 SCN9AQ15858 1988 aa28.33■■■□□ 2.13
CDKN2A-206ENST00000494262 E9PSI1 815 aa28.33■■■□□ 2.13
CDKN2A-206ENST00000494262 ZC3H15Q8WU90 426 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-206ENST00000494262 PGAP2Q9UHJ9 254 aa28.33■■■□□ 2.13
CDKN2A-206ENST00000494262 WTIPA6NIX2 430 aaPredicted RBP28.32■■■□□ 2.12
CDKN2A-206ENST00000494262 VIL1P09327 827 aaKnown RBP28.32■■■□□ 2.12
CDKN2A-206ENST00000494262 VEGFBP49765 207 aa28.32■■■□□ 2.12
CDKN2A-206ENST00000494262 SAMD7Q7Z3H4 446 aa28.32■■■□□ 2.12
CDKN2A-206ENST00000494262 CCT4P50991 539 aaKnown RBP28.31■■■□□ 2.12
CDKN2A-206ENST00000494262 TBC1D10BQ4KMP7 808 aaPredicted RBP28.31■■■□□ 2.12
CDKN2A-206ENST00000494262 SLC4A10Q6U841 1118 aa28.31■■■□□ 2.12
CDKN2A-206ENST00000494262 MPHOSPH8Q99549 860 aa28.31■■■□□ 2.12
CDKN2A-206ENST00000494262 GLIS2Q9BZE0 524 aaPredicted RBP28.31■■■□□ 2.12
CDKN2A-206ENST00000494262 RASSF10A6NK89 507 aa28.3■■■□□ 2.12
CDKN2A-206ENST00000494262 DEFB115Q30KQ5 88 aa28.3■■■□□ 2.12
CDKN2A-206ENST00000494262 TRPM7Q96QT4 1865 aa28.29■■■□□ 2.12
CDKN2A-206ENST00000494262 MED23Q9ULK4 1368 aa28.29■■■□□ 2.12
CDKN2A-206ENST00000494262 ANKRD18BA2A2Z9 1011 aa28.29■■■□□ 2.12
CDKN2A-206ENST00000494262 FOXO4P98177 505 aa28.29■■■□□ 2.12
CDKN2A-206ENST00000494262 CST9Q5W186 159 aa28.29■■■□□ 2.12
CDKN2A-206ENST00000494262 CHMP3Q9Y3E7 222 aa28.29■■■□□ 2.12
CDKN2A-206ENST00000494262 GRM8O00222 908 aa28.28■■■□□ 2.12
CDKN2A-206ENST00000494262 EGFRP00533 1210 aa28.28■■■□□ 2.12
CDKN2A-206ENST00000494262 RBM26Q5T8P6 1007 aaKnown RBP28.28■■■□□ 2.12
CDKN2A-206ENST00000494262 IFFO2Q5TF58 517 aa28.28■■■□□ 2.12
CDKN2A-206ENST00000494262 ANKRD2Q9GZV1 360 aa28.28■■■□□ 2.12
CDKN2A-206ENST00000494262 ALDH1L1O75891 902 aa28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 SLFN5Q08AF3 891 aa28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 RSBN1LQ6PCB5 846 aaPredicted RBP28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 CDC37L1Q7L3B6 337 aa28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 PODNQ7Z5L7 613 aa28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 SRCIN1Q9C0H9 1055 aa28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 C9orf78Q9NZ63 289 aaPredicted RBP28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 LEMD3Q9Y2U8 911 aa28.27■■■□□ 2.12
CDKN2A-206ENST00000494262 CCER2I3L3R5 266 aa28.26■■■□□ 2.11
CDKN2A-206ENST00000494262 CELF2O95319 508 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-206ENST00000494262 IFIT5Q13325 482 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-206ENST00000494262 MRPL50Q8N5N7 158 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-206ENST00000494262 USP17L3A6NCW0 530 aa28.25■■■□□ 2.11
CDKN2A-206ENST00000494262 USP17L4A6NCW7 530 aa28.25■■■□□ 2.11
CDKN2A-206ENST00000494262 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
CDKN2A-206ENST00000494262 USP17L1Q7RTZ2 530 aa28.25■■■□□ 2.11
CDKN2A-206ENST00000494262 ZNF804BA4D1E1 1349 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 CHRNDQ07001 517 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 KIF4BQ2VIQ3 1234 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 EPHA10Q5JZY3 1008 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 PAXIP1Q6ZW49 1069 aaPredicted RBP28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 USP48Q86UV5 1035 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 AGBL3Q8NEM8 1001 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 ZNF408Q9H9D4 720 aa28.24■■■□□ 2.11
CDKN2A-206ENST00000494262 PSME4Q14997 1843 aa28.23■■■□□ 2.11
CDKN2A-206ENST00000494262 KCNJ4P48050 445 aa28.23■■■□□ 2.11
CDKN2A-206ENST00000494262 COL13A1Q5TAT6 717 aaPredicted RBP28.23■■■□□ 2.11
CDKN2A-206ENST00000494262 CDCA7LQ96GN5 454 aa28.23■■■□□ 2.11
CDKN2A-206ENST00000494262 ZNF609O15014 1411 aa28.23■■■□□ 2.11
CDKN2A-206ENST00000494262 WDR33Q9C0J8 1336 aaKnown RBP28.22■■■□□ 2.11
CDKN2A-206ENST00000494262 TXNRD3Q86VQ6 643 aa28.22■■■□□ 2.11
CDKN2A-206ENST00000494262 SSH1Q8WYL5 1049 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms