RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 KIF4AO95239 1232 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 IGHA2P01877 340 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 CES1P23141 567 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 C20orf204Q6ZNR8 217 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 TMC7Q7Z402 723 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 MICALL1Q8N3F8 863 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 FRRS1LQ9P0K9 344 aa12.93□□□□□ -0.34
HMGB3P14-201ENST00000494195 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 J3QW42 95 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 M0R082 166 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 GPR182O15218 404 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 NEFLP07196 543 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 SNRPNP63162 240 aaKnown RBP12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 PERM1Q5SV97 790 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 ZNF587Q96SQ5 575 aaPredicted RBP12.92□□□□□ -0.34
HMGB3P14-201ENST00000494195 GHRHP01286 108 aa12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 ELMSAN1Q6PJG2 1045 aa12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 ALKBH8Q96BT7 664 aaKnown RBP12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 SCARF2Q96GP6 870 aaPredicted RBP12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 RBSNQ9H1K0 784 aa12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 PRDM6Q9NQX0 595 aa12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 MKL2Q9ULH7 1088 aa12.91□□□□□ -0.34
HMGB3P14-201ENST00000494195 BEND7Q8N7W2 519 aaPredicted RBP12.9□□□□□ -0.34
HMGB3P14-201ENST00000494195 SPACA7Q96KW9 195 aa12.9□□□□□ -0.34
HMGB3P14-201ENST00000494195 LPIN3Q9BQK8 851 aa12.9□□□□□ -0.34
HMGB3P14-201ENST00000494195 RGS9O75916 674 aaPredicted RBP12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 NUDT8Q8WV74 236 aa12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 ASB16Q96NS5 453 aa12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 SALL4Q9UJQ4 1053 aa12.89□□□□□ -0.35
HMGB3P14-201ENST00000494195 EREGO14944 169 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 LILRB5O75023 590 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 LINC00114Q6XXX2 140 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 TTC9Q92623 222 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 PLD4Q96BZ4 506 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 NIF3L1Q9GZT8 377 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
HMGB3P14-201ENST00000494195 C8orf86Q6ZUL3 223 aa12.87□□□□□ -0.35
HMGB3P14-201ENST00000494195 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
HMGB3P14-201ENST00000494195 PIK3R2O00459 728 aa12.86□□□□□ -0.35
HMGB3P14-201ENST00000494195 ORC1Q13415 861 aa12.86□□□□□ -0.35
HMGB3P14-201ENST00000494195 CEP120Q8N960 986 aa12.86□□□□□ -0.35
HMGB3P14-201ENST00000494195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
HMGB3P14-201ENST00000494195 GNB5O14775 395 aa12.85□□□□□ -0.35
HMGB3P14-201ENST00000494195 TREHO43280 583 aa12.85□□□□□ -0.35
HMGB3P14-201ENST00000494195 EDN3P14138 238 aa12.84□□□□□ -0.35
HMGB3P14-201ENST00000494195 AFF1P51825 1210 aaKnown RBP12.84□□□□□ -0.35
HMGB3P14-201ENST00000494195 DSC3Q14574 896 aa12.84□□□□□ -0.35
HMGB3P14-201ENST00000494195 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
HMGB3P14-201ENST00000494195 RNF225M0QZC1 329 aaPredicted RBP12.83□□□□□ -0.36
HMGB3P14-201ENST00000494195 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.36
HMGB3P14-201ENST00000494195 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
HMGB3P14-201ENST00000494195 NID1P14543 1247 aa12.82□□□□□ -0.36
HMGB3P14-201ENST00000494195 ATP11AP98196 1134 aa12.82□□□□□ -0.36
HMGB3P14-201ENST00000494195 PLCB3Q01970 1234 aa12.82□□□□□ -0.36
HMGB3P14-201ENST00000494195 GRIK5Q16478 980 aa12.82□□□□□ -0.36
HMGB3P14-201ENST00000494195 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
HMGB3P14-201ENST00000494195 EIF1AYO14602 144 aaKnown RBP12.81□□□□□ -0.36
HMGB3P14-201ENST00000494195 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
HMGB3P14-201ENST00000494195 TRIM11Q96F44 468 aa12.81□□□□□ -0.36
HMGB3P14-201ENST00000494195 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
HMGB3P14-201ENST00000494195 PBX4Q9BYU1 374 aa12.81□□□□□ -0.36
HMGB3P14-201ENST00000494195 SMNDC1O75940 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMGB3P14-201ENST00000494195 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
HMGB3P14-201ENST00000494195 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
HMGB3P14-201ENST00000494195 GALNT12Q8IXK2 581 aa12.8□□□□□ -0.36
HMGB3P14-201ENST00000494195 DZANK1Q9NVP4 752 aa12.8□□□□□ -0.36
HMGB3P14-201ENST00000494195 ACPPP15309 386 aa12.79□□□□□ -0.36
HMGB3P14-201ENST00000494195 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
HMGB3P14-201ENST00000494195 FMR1Q06787 632 aaKnown RBP eCLIP12.78□□□□□ -0.36
HMGB3P14-201ENST00000494195 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
HMGB3P14-201ENST00000494195 PLVAPQ9BX97 442 aa12.78□□□□□ -0.36
HMGB3P14-201ENST00000494195 TRIM33Q9UPN9 1127 aa12.78□□□□□ -0.36
HMGB3P14-201ENST00000494195 IRS1P35568 1242 aa12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 PEAR1Q5VY43 1037 aaPredicted RBP12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 GDF6Q6KF10 455 aaPredicted RBP12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 OSMRQ99650 979 aa12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 SUV39H2Q9H5I1 410 aa12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 LATS2Q9NRM7 1088 aa12.77□□□□□ -0.37
HMGB3P14-201ENST00000494195 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
HMGB3P14-201ENST00000494195 NFKBIEO00221 500 aa12.76□□□□□ -0.37
HMGB3P14-201ENST00000494195 TRIM26Q12899 539 aaPredicted RBP12.76□□□□□ -0.37
HMGB3P14-201ENST00000494195 MSL1Q68DK7 614 aa12.76□□□□□ -0.37
HMGB3P14-201ENST00000494195 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
HMGB3P14-201ENST00000494195 PNMA6FA0A0J9YX94 578 aa12.75□□□□□ -0.37
HMGB3P14-201ENST00000494195 ANKRD33BA6NCL7 494 aa12.75□□□□□ -0.37
HMGB3P14-201ENST00000494195 ENOX2Q16206 610 aaKnown RBP12.75□□□□□ -0.37
HMGB3P14-201ENST00000494195 WFDC8Q8IUA0 241 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms