RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 Q8N3U1 123 aa6.81□□□□□ -1.32
VPS36-205ENST00000492650 ABTB2Q8N961 1025 aa6.81□□□□□ -1.32
VPS36-205ENST00000492650 TP53INP1Q96A56 240 aa6.81□□□□□ -1.32
VPS36-205ENST00000492650 SLAIN2Q9P270 581 aa6.81□□□□□ -1.32
VPS36-205ENST00000492650 ZBTB39O15060 712 aa6.8□□□□□ -1.32
VPS36-205ENST00000492650 ZMYM1Q5SVZ6 1142 aa6.8□□□□□ -1.32
VPS36-205ENST00000492650 IGF2-ASQ6U949 168 aa6.8□□□□□ -1.32
VPS36-205ENST00000492650 IL22RA1Q8N6P7 574 aa6.8□□□□□ -1.32
VPS36-205ENST00000492650 SPACA7Q96KW9 195 aa6.8□□□□□ -1.32
VPS36-205ENST00000492650 SEPT3Q9UH03 358 aa6.8□□□□□ -1.32
VPS36-205ENST00000492650 SCNN1AP37088 669 aa6.79□□□□□ -1.32
VPS36-205ENST00000492650 IREB2P48200 963 aaKnown RBP6.79□□□□□ -1.32
VPS36-205ENST00000492650 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
VPS36-205ENST00000492650 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
VPS36-205ENST00000492650 DEAF1O75398 565 aaPredicted RBP6.78□□□□□ -1.32
VPS36-205ENST00000492650 HOXD8P13378 290 aaPredicted RBP6.78□□□□□ -1.32
VPS36-205ENST00000492650 HYAL2Q12891 473 aa6.78□□□□□ -1.32
VPS36-205ENST00000492650 PRSS36Q5K4E3 855 aa6.78□□□□□ -1.32
VPS36-205ENST00000492650 CCDC82Q8N4S0 544 aa6.78□□□□□ -1.32
VPS36-205ENST00000492650 OR13H1Q8NG92 308 aa6.78□□□□□ -1.32
VPS36-205ENST00000492650 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
VPS36-205ENST00000492650 H2AFB2P0C5Z0 115 aa6.77□□□□□ -1.33
VPS36-205ENST00000492650 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.33
VPS36-205ENST00000492650 ATCAYQ86WG3 371 aa6.77□□□□□ -1.33
VPS36-205ENST00000492650 ABI2Q9NYB9 513 aaPredicted RBP6.77□□□□□ -1.33
VPS36-205ENST00000492650 SCO2A0A1W2PP80 73 aa6.76□□□□□ -1.33
VPS36-205ENST00000492650 DLL1O00548 723 aa6.76□□□□□ -1.33
VPS36-205ENST00000492650 NOS3P29474 1203 aa6.76□□□□□ -1.33
VPS36-205ENST00000492650 CEP135Q66GS9 1140 aa6.76□□□□□ -1.33
VPS36-205ENST00000492650 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
VPS36-205ENST00000492650 LACRTQ9GZZ8 138 aa6.76□□□□□ -1.33
VPS36-205ENST00000492650 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
VPS36-205ENST00000492650 SMNDC1O75940 238 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS36-205ENST00000492650 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
VPS36-205ENST00000492650 ATP11AP98196 1134 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 NCAPG2Q86XI2 1143 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 TTC16Q8NEE8 873 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 SSBP4Q9BWG4 385 aaPredicted RBP6.75□□□□□ -1.33
VPS36-205ENST00000492650 MUC3BQ9H195 1237 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 ELP3Q9H9T3 547 aa6.75□□□□□ -1.33
VPS36-205ENST00000492650 PCSK2P16519 638 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 CDC25BP30305 580 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 DNM1Q05193 864 aaKnown RBP6.74□□□□□ -1.33
VPS36-205ENST00000492650 SETDB1Q15047 1291 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 PDE12Q6L8Q7 609 aaKnown RBP6.74□□□□□ -1.33
VPS36-205ENST00000492650 MAP4K3Q8IVH8 894 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 HELQQ8TDG4 1101 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 EDEM1Q92611 657 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
VPS36-205ENST00000492650 RASSF4Q9H2L5 321 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 SRA1Q9HD15 236 aaKnown RBP6.74□□□□□ -1.33
VPS36-205ENST00000492650 TMEM63CQ9P1W3 806 aa6.74□□□□□ -1.33
VPS36-205ENST00000492650 FAM177BA6PVY3 158 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 PPP1R15AO75807 674 aaPredicted RBP6.73□□□□□ -1.33
VPS36-205ENST00000492650 ALX3O95076 343 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
VPS36-205ENST00000492650 AAMPQ13685 434 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 C8orf34Q49A92 452 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 NOM1Q5C9Z4 860 aaKnown RBP6.73□□□□□ -1.33
VPS36-205ENST00000492650 TXNDC11Q6PKC3 985 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 GTF3C2Q8WUA4 911 aaPredicted RBP6.73□□□□□ -1.33
VPS36-205ENST00000492650 MEGF10Q96KG7 1140 aa6.73□□□□□ -1.33
VPS36-205ENST00000492650 CDC27P30260 824 aa6.72□□□□□ -1.33
VPS36-205ENST00000492650 FOXD4L6Q3SYB3 417 aaPredicted RBP6.72□□□□□ -1.33
VPS36-205ENST00000492650 FOXD4L3Q6VB84 417 aaPredicted RBP6.72□□□□□ -1.33
VPS36-205ENST00000492650 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
VPS36-205ENST00000492650 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 KIF4AO95239 1232 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 MPSTP25325 297 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 C14orf37Q86TY3 774 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 TMEM130Q8N3G9 435 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 PBX4Q9BYU1 374 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 CNTN3Q9P232 1028 aa6.71□□□□□ -1.34
VPS36-205ENST00000492650 A6NHS1 94 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
VPS36-205ENST00000492650 CES1P23141 567 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 SSFA2P28290 1259 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 EIF1AXP47813 144 aaKnown RBP6.7□□□□□ -1.34
VPS36-205ENST00000492650 MTMR3Q13615 1198 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 AGGF1Q8N302 714 aaeCLIP6.7□□□□□ -1.34
VPS36-205ENST00000492650 CEP120Q8N960 986 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 GALNT11Q8NCW6 608 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 GGNBP2Q9H3C7 697 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 C1orf115Q9H7X2 142 aa6.7□□□□□ -1.34
VPS36-205ENST00000492650 SH2B1Q9NRF2 756 aaPredicted RBP6.7□□□□□ -1.34
VPS36-205ENST00000492650 PDGFAP04085 211 aa6.69□□□□□ -1.34
VPS36-205ENST00000492650 GLB1P16278 677 aa6.69□□□□□ -1.34
VPS36-205ENST00000492650 PTPRAP18433 802 aa6.69□□□□□ -1.34
VPS36-205ENST00000492650 MZF1P28698 734 aaPredicted RBP6.69□□□□□ -1.34
VPS36-205ENST00000492650 CD68P34810 354 aaPredicted RBP6.69□□□□□ -1.34
VPS36-205ENST00000492650 ALKBH2Q6NS38 261 aa6.69□□□□□ -1.34
VPS36-205ENST00000492650 DZIP1LQ8IYY4 767 aaKnown RBP6.69□□□□□ -1.34
VPS36-205ENST00000492650 C1orf127Q8N9H9 656 aa6.69□□□□□ -1.34
VPS36-205ENST00000492650 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms