RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 COPRSQ9NQ92 184 aa15.89■□□□□ 0.13
LSS-210ENST00000491729 TAF1P21675 1872 aa15.89■□□□□ 0.13
LSS-210ENST00000491729 RGPD3A6NKT7 1758 aaPredicted RBP15.89■□□□□ 0.13
LSS-210ENST00000491729 RGPD4Q7Z3J3 1758 aa15.89■□□□□ 0.13
LSS-210ENST00000491729 TRIM6-TRIM34B2RNG4 842 aa15.89■□□□□ 0.13
LSS-210ENST00000491729 CHMLP26374 656 aa15.89■□□□□ 0.13
LSS-210ENST00000491729 SLC15A2Q16348 729 aa15.89■□□□□ 0.13
LSS-210ENST00000491729 PDE8AO60658 829 aa15.88■□□□□ 0.13
LSS-210ENST00000491729 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
LSS-210ENST00000491729 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
LSS-210ENST00000491729 RGL2O15211 777 aa15.87■□□□□ 0.13
LSS-210ENST00000491729 ITGA6P23229 1130 aa15.87■□□□□ 0.13
LSS-210ENST00000491729 BAG6P46379 1132 aa15.87■□□□□ 0.13
LSS-210ENST00000491729 NBPF5PQ86XG9 351 aaPredicted RBP15.87■□□□□ 0.13
LSS-210ENST00000491729 RILPL2Q969X0 211 aa15.87■□□□□ 0.13
LSS-210ENST00000491729 COL24A1Q17RW2 1714 aa15.87■□□□□ 0.13
LSS-210ENST00000491729 SLC10A5Q5PT55 438 aa15.86■□□□□ 0.13
LSS-210ENST00000491729 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
LSS-210ENST00000491729 ANO2Q9NQ90 1003 aa15.86■□□□□ 0.13
LSS-210ENST00000491729 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
LSS-210ENST00000491729 MYH3P11055 1940 aa15.86■□□□□ 0.13
LSS-210ENST00000491729 CARMIL3Q8ND23 1372 aa15.86■□□□□ 0.13
LSS-210ENST00000491729 POLRMTO00411 1230 aaKnown RBP15.85■□□□□ 0.13
LSS-210ENST00000491729 NEK4P51957 841 aa15.85■□□□□ 0.13
LSS-210ENST00000491729 TFCP2Q12800 502 aa15.85■□□□□ 0.13
LSS-210ENST00000491729 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
LSS-210ENST00000491729 PRR5LQ6MZQ0 368 aa15.85■□□□□ 0.13
LSS-210ENST00000491729 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
LSS-210ENST00000491729 TLR7Q9NYK1 1049 aaKnown RBP15.85■□□□□ 0.13
LSS-210ENST00000491729 WTIPA6NIX2 430 aaPredicted RBP15.85■□□□□ 0.13
LSS-210ENST00000491729 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.133e-17■■■■■ 38.2
LSS-210ENST00000491729 TTC41PQ6P2S7 1318 aa15.84■□□□□ 0.13
LSS-210ENST00000491729 SERPINB2P05120 415 aa15.84■□□□□ 0.13
LSS-210ENST00000491729 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.13
LSS-210ENST00000491729 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
LSS-210ENST00000491729 SNAP23O00161 211 aa15.83■□□□□ 0.13
LSS-210ENST00000491729 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.13
LSS-210ENST00000491729 OS9Q13438 667 aaPredicted RBP15.83■□□□□ 0.13
LSS-210ENST00000491729 CUL4AQ13619 759 aa15.83■□□□□ 0.13
LSS-210ENST00000491729 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.13
LSS-210ENST00000491729 TPTE2Q6XPS3 522 aa15.83■□□□□ 0.13
LSS-210ENST00000491729 CNTROBQ8N137 903 aa15.83■□□□□ 0.13
LSS-210ENST00000491729 CASZ1Q86V15 1759 aa15.83■□□□□ 0.12
LSS-210ENST00000491729 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.12
LSS-210ENST00000491729 MCTP1Q6DN14 999 aa15.83■□□□□ 0.12
LSS-210ENST00000491729 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
LSS-210ENST00000491729 CCDC8Q9H0W5 538 aaPredicted RBP15.83■□□□□ 0.12
LSS-210ENST00000491729 RIPOR2Q9Y4F9 1068 aa15.83■□□□□ 0.12
LSS-210ENST00000491729 EYA2O00167 538 aa15.82■□□□□ 0.12
LSS-210ENST00000491729 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
LSS-210ENST00000491729 ERC1Q8IUD2 1116 aa15.82■□□□□ 0.12
LSS-210ENST00000491729 TMX3Q96JJ7 454 aa15.82■□□□□ 0.12
LSS-210ENST00000491729 LAMB2P55268 1798 aa15.82■□□□□ 0.12
LSS-210ENST00000491729 ZGPATQ8N5A5 531 aaKnown RBP15.82■□□□□ 0.12
LSS-210ENST00000491729 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
LSS-210ENST00000491729 STK32BQ9NY57 414 aa15.82■□□□□ 0.12
LSS-210ENST00000491729 RAD50Q92878 1312 aa15.81■□□□□ 0.12
LSS-210ENST00000491729 MMP10P09238 476 aa15.81■□□□□ 0.12
LSS-210ENST00000491729 ZNF445P59923 1031 aa15.81■□□□□ 0.12
LSS-210ENST00000491729 TIMM10P62072 90 aa15.81■□□□□ 0.12
LSS-210ENST00000491729 SF3B3Q15393 1217 aaKnown RBP15.81■□□□□ 0.12
LSS-210ENST00000491729 HELBQ8NG08 1087 aaPredicted RBP15.81■□□□□ 0.12
LSS-210ENST00000491729 CELF1Q92879 486 aaKnown RBP15.81■□□□□ 0.12
LSS-210ENST00000491729 GPATCH3Q96I76 525 aa15.81■□□□□ 0.12
LSS-210ENST00000491729 HSPA4P34932 840 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
LSS-210ENST00000491729 LMBRD1Q9NUN5 540 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 ANKRD18BA2A2Z9 1011 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 GLRX3O76003 335 aaKnown RBP15.8■□□□□ 0.12
LSS-210ENST00000491729 LDHAL6AQ6ZMR3 332 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 AACSQ86V21 672 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 CNBD1Q8NA66 436 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 NYXQ9GZU5 481 aa15.8■□□□□ 0.12
LSS-210ENST00000491729 NLGN1Q8N2Q7 840 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 UTRNP46939 3433 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 SGSM2O43147 1006 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 MBD3O95983 291 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 CCDC125Q86Z20 511 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 VGLL2Q8N8G2 317 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 DBNLQ9UJU6 430 aaKnown RBP15.79■□□□□ 0.12
LSS-210ENST00000491729 PALD1Q9ULE6 856 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 FPGT-TNNI3KV9GXZ4 949 aa15.79■□□□□ 0.12
LSS-210ENST00000491729 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 CIAO1O76071 339 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 CCDC173Q0VFZ6 552 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 PKP1Q13835 747 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 CCDC152Q4G0S7 254 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 GAS2L3Q86XJ1 694 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
LSS-210ENST00000491729 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 RUFY2Q8WXA3 655 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 TRIM44Q96DX7 344 aaPredicted RBP15.78■□□□□ 0.12
LSS-210ENST00000491729 DBNDD2Q9BQY9 259 aa15.78■□□□□ 0.12
LSS-210ENST00000491729 TAF5LO75529 589 aa15.77■□□□□ 0.12
LSS-210ENST00000491729 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.12
LSS-210ENST00000491729 NLRP3Q96P20 1036 aa15.77■□□□□ 0.12
LSS-210ENST00000491729 ZDHHC9Q9Y397 364 aa15.77■□□□□ 0.12
LSS-210ENST00000491729 NDUFB9Q9Y6M9 179 aa15.77■□□□□ 0.12
LSS-210ENST00000491729 BRD1O95696 1058 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms