RNA–Protein interactions for RNA: ENST00000488779.5

EXOSC8-208, Transcript of exosome component 8, human

TSL 5

Gene EXOSC8, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC8-208	ENST00000488779	TCERG1	O14776	1098 aa	Known RBP	11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	PDE8A	O60658	829 aa		11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	GCKR	Q14397	625 aa		11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CCDC93	Q567U6	631 aa		11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	DDX46	Q7L014	1031 aa	Known RBP	11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	PLA2G12B	Q9BX93	195 aa		11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	KIF16B	Q96L93	1317 aa		11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	RTL9	Q8NET4	1388 aa		11.77	□□□□□ -0.53
EXOSC8-208	ENST00000488779	FAM205C	A6NFA0	338 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	HCLS1	P14317	486 aa	Predicted RBP	11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	LMNB1	P20700	586 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	MMRN1	Q13201	1228 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CCDC152	Q4G0S7	254 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	BEND3	Q5T5X7	828 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	ARHGAP45	Q92619	1136 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	TMX4	Q9H1E5	349 aa	Predicted RBP	11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	VPS33B	Q9H267	617 aa		11.76	□□□□□ -0.53
EXOSC8-208	ENST00000488779	DDX60	Q8IY21	1712 aa	Known RBP	11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SLX4	Q8IY92	1834 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	NFKBIE	O00221	500 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	C21orf2	O43822	256 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	RARS	P54136	660 aa	Known RBP	11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	GRAP	Q13588	217 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	GRAPL	Q8TC17	118 aa	Predicted RBP	11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	HS3ST6	Q96QI5	342 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	PSMD1	Q99460	953 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SRCIN1	Q9C0H9	1055 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	TAOK3	Q9H2K8	898 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SMC4	Q9NTJ3	1288 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	ATP6V0A2	Q9Y487	856 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SNED1	Q8TER0	1413 aa		11.75	□□□□□ -0.53
EXOSC8-208	ENST00000488779	FER1L6	Q2WGJ9	1857 aa		11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779		G3V3G9	751 aa		11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CWF19L2	Q2TBE0	894 aa	Known RBP	11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SP8	Q8IXZ3	490 aa		11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SYNE4	Q8N205	404 aa		11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779	API5	Q9BZZ5	524 aa	Known RBP	11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779	ABCC4	O15439	1325 aa		11.74	□□□□□ -0.53
EXOSC8-208	ENST00000488779	UTY	O14607	1347 aa		11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	PPEF1	O14829	653 aa	Predicted RBP	11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	IPO8	O15397	1037 aa	Known RBP	11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CASP7	P55210	303 aa		11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	C9orf131	Q5VYM1	1079 aa		11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	WWC3	Q9ULE0	1092 aa		11.73	□□□□□ -0.53
EXOSC8-208	ENST00000488779	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779		F6X3S4	739 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	GRM8	O00222	908 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CSF1R	P07333	972 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CCT4	P50991	539 aa	Known RBP	11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CTSW	P56202	376 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	UBE3B	Q7Z3V4	1068 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SUPT20H	Q8NEM7	779 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	ZFP91	Q96JP5	570 aa	Predicted RBP	11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	KRTAP3-3	Q9BYR6	98 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	KRTAP3-2	Q9BYR7	98 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	HDAC5	Q9UQL6	1122 aa		11.72	□□□□□ -0.53
EXOSC8-208	ENST00000488779	RIOK3	O14730	519 aa	Known RBP	11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	RPS8	P62241	208 aa	Known RBP	11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	TMEM92	Q6UXU6	159 aa		11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	TTLL11	Q8NHH1	800 aa		11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	CDC5L	Q99459	802 aa	Known RBP	11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	RNF181	Q9P0P0	153 aa		11.71	□□□□□ -0.53
EXOSC8-208	ENST00000488779	SBF1	O95248	1867 aa		11.7	□□□□□ -0.54
EXOSC8-208	ENST00000488779	LRRC37A	A6NMS7	1700 aa		11.7	□□□□□ -0.54
EXOSC8-208	ENST00000488779	MS4A4A	Q96JQ5	239 aa		11.7	□□□□□ -0.54
EXOSC8-208	ENST00000488779	MYH3	P11055	1940 aa		11.69	□□□□□ -0.54
EXOSC8-208	ENST00000488779	RTL5	Q5HYW3	569 aa	Predicted RBP	11.69	□□□□□ -0.54
EXOSC8-208	ENST00000488779	SLC4A10	Q6U841	1118 aa		11.69	□□□□□ -0.54
EXOSC8-208	ENST00000488779	BCL2L13	Q9BXK5	485 aa		11.69	□□□□□ -0.54
EXOSC8-208	ENST00000488779	PODXL2	Q9NZ53	605 aa		11.69	□□□□□ -0.54
EXOSC8-208	ENST00000488779	NOB1	Q9ULX3	412 aa	Known RBP	11.69	□□□□□ -0.54
EXOSC8-208	ENST00000488779	DICER1	Q9UPY3	1922 aa	Known RBP	11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	CACNA1S	Q13698	1873 aa		11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	KDM2B	Q8NHM5	1336 aa		11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	IARS	P41252	1262 aa	Known RBP	11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	RASSF7	Q02833	373 aa		11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	DPP8	Q6V1X1	898 aa	Predicted RBP	11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ANKRD18A	Q8IVF6	992 aa		11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	MPND	Q8N594	471 aa		11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	CELF1	Q92879	486 aa	Known RBP	11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	BSDC1	Q9NW68	430 aa	Predicted RBP	11.68	□□□□□ -0.54
EXOSC8-208	ENST00000488779	PRELP	P51888	382 aa		11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	FOXO4	P98177	505 aa		11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	RABL6	Q3YEC7	729 aa	Predicted RBP	11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	INTS3	Q68E01	1043 aa	Known RBP	11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ATF7IP	Q6VMQ6	1270 aa		11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	MICALL2	Q8IY33	904 aa		11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	JDP2	Q8WYK2	163 aa		11.67	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ANKRD18B	A2A2Z9	1011 aa		11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	GLTPD2	A6NH11	291 aa		11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	MS4A1	P11836	297 aa		11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	IGHMBP2	P38935	993 aa	Known RBP	11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	IFIT5	Q13325	482 aa	Known RBP	11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ZKSCAN2	Q63HK3	967 aa		11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	EYA3	Q99504	573 aa		11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	USP44	Q9H0E7	712 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 585 ms