RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PARP10Q53GL7 1025 aa12.97□□□□□ -0.33
PTPN7-213ENST00000486116 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
PTPN7-213ENST00000486116 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
PTPN7-213ENST00000486116 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
PTPN7-213ENST00000486116 VIL1P09327 827 aaKnown RBP12.96□□□□□ -0.33
PTPN7-213ENST00000486116 MYL6BP14649 208 aa12.96□□□□□ -0.33
PTPN7-213ENST00000486116 CAP1Q01518 475 aa12.96□□□□□ -0.33
PTPN7-213ENST00000486116 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
PTPN7-213ENST00000486116 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
PTPN7-213ENST00000486116 RRP7AQ9Y3A4 280 aaKnown RBP12.96□□□□□ -0.33
PTPN7-213ENST00000486116 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
PTPN7-213ENST00000486116 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-213ENST00000486116 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
PTPN7-213ENST00000486116 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
PTPN7-213ENST00000486116 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
PTPN7-213ENST00000486116 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
PTPN7-213ENST00000486116 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
PTPN7-213ENST00000486116 TTLL12Q14166 644 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-213ENST00000486116 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 PRO3102Q9H379 93 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
PTPN7-213ENST00000486116 LAMA3Q16787 3333 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 UNC80Q8N2C7 3258 aa12.94□□□□□ -0.34
PTPN7-213ENST00000486116 C6orf229H3BNL8 230 aa12.93□□□□□ -0.34
PTPN7-213ENST00000486116 GPSM2P81274 684 aa12.93□□□□□ -0.34
PTPN7-213ENST00000486116 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
PTPN7-213ENST00000486116 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
PTPN7-213ENST00000486116 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
PTPN7-213ENST00000486116 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
PTPN7-213ENST00000486116 IGF2BP3O00425 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN7-213ENST00000486116 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
PTPN7-213ENST00000486116 MYOZ2Q9NPC6 264 aa12.92□□□□□ -0.34
PTPN7-213ENST00000486116 SOX1O00570 391 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-213ENST00000486116 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
PTPN7-213ENST00000486116 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-213ENST00000486116 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
PTPN7-213ENST00000486116 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
PTPN7-213ENST00000486116 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
PTPN7-213ENST00000486116 GMLQ99445 158 aa12.91□□□□□ -0.34
PTPN7-213ENST00000486116 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 PRKG1Q13976 671 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-213ENST00000486116 NBPF9Q3BBW0 867 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 LDLRAD1Q5T700 205 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 LRP10Q7Z4F1 713 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 EYA3Q99504 573 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
PTPN7-213ENST00000486116 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-213ENST00000486116 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
PTPN7-213ENST00000486116 CRHR2Q13324 411 aa12.89□□□□□ -0.35
PTPN7-213ENST00000486116 SLC4A8Q2Y0W8 1093 aa12.89□□□□□ -0.35
PTPN7-213ENST00000486116 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
PTPN7-213ENST00000486116 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
PTPN7-213ENST00000486116 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-213ENST00000486116 MYCP01106 439 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-213ENST00000486116 NF2P35240 595 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 INHBEP58166 350 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 ARMC9Q7Z3E5 817 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
PTPN7-213ENST00000486116 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-213ENST00000486116 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
PTPN7-213ENST00000486116 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
PTPN7-213ENST00000486116 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
PTPN7-213ENST00000486116 SP3Q02447 781 aa12.87□□□□□ -0.35
PTPN7-213ENST00000486116 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
PTPN7-213ENST00000486116 DPF3Q92784 378 aa12.87□□□□□ -0.35
PTPN7-213ENST00000486116 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
PTPN7-213ENST00000486116 ZC3H12CQ9C0D7 883 aaKnown RBP12.87□□□□□ -0.35
PTPN7-213ENST00000486116 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
PTPN7-213ENST00000486116 ALPK3Q96L96 1907 aa12.87□□□□□ -0.35
PTPN7-213ENST00000486116 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
PTPN7-213ENST00000486116 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
PTPN7-213ENST00000486116 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
PTPN7-213ENST00000486116 PDIA6Q15084 440 aa12.86□□□□□ -0.35
PTPN7-213ENST00000486116 NBPF11Q86T75 865 aa12.86□□□□□ -0.35
PTPN7-213ENST00000486116 WNK4Q96J92 1243 aa12.86□□□□□ -0.35
PTPN7-213ENST00000486116 ANGEL1Q9UNK9 670 aaKnown RBP12.86□□□□□ -0.35
PTPN7-213ENST00000486116 ZBTB48P10074 688 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-213ENST00000486116 PROSER3Q2NL68 480 aa12.85□□□□□ -0.35
PTPN7-213ENST00000486116 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
PTPN7-213ENST00000486116 CLMNQ96JQ2 1002 aa12.85□□□□□ -0.35
PTPN7-213ENST00000486116 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-213ENST00000486116 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
PTPN7-213ENST00000486116 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
PTPN7-213ENST00000486116 G3V3G9 751 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 WNT10BO00744 389 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 UFL1O94874 794 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 ANXA1P04083 346 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 PTPN18Q99952 460 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms