RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 DDX46Q7L014 1031 aaKnown RBP20.18■□□□□ 0.82
CTSA-207ENST00000484855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.18■□□□□ 0.82
CTSA-207ENST00000484855 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 EP400Q96L91 3159 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 TTC39AQ5SRH9 613 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 TBC1D9BQ66K14 1250 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 BICDL1Q6ZP65 573 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 PAG1Q9NWQ8 432 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 UBR3Q6ZT12 1888 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 CCDC171Q6TFL3 1326 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 GOLIM4O00461 696 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 HSP90AA1P07900 732 aaKnown RBP20.17■□□□□ 0.82
CTSA-207ENST00000484855 VGLL2Q8N8G2 317 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 KBTBD3Q8NAB2 608 aa20.17■□□□□ 0.82
CTSA-207ENST00000484855 ABCC12Q96J65 1359 aa20.16■□□□□ 0.82
CTSA-207ENST00000484855 PTH1RQ03431 593 aa20.16■□□□□ 0.82
CTSA-207ENST00000484855 MYH7P12883 1935 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 MROH5Q6ZUA9 1318 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 NEK4P51957 841 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 ERFEQ4G0M1 354 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 SEC31BQ9NQW1 1179 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 PDE8BO95263 885 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 ZNF772Q68DY9 489 aaPredicted RBP20.15■□□□□ 0.82
CTSA-207ENST00000484855 AMIGO3Q86WK7 504 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
CTSA-207ENST00000484855 MPHOSPH8Q99549 860 aa20.15■□□□□ 0.82
CTSA-207ENST00000484855 AKAP11Q9UKA4 1901 aa20.14■□□□□ 0.82
CTSA-207ENST00000484855 SETDB2Q96T68 719 aa20.14■□□□□ 0.81
CTSA-207ENST00000484855 LRRC4BQ9NT99 713 aa20.14■□□□□ 0.81
CTSA-207ENST00000484855 IGHMBP2P38935 993 aaKnown RBP20.14■□□□□ 0.81
CTSA-207ENST00000484855 NYXQ9GZU5 481 aa20.14■□□□□ 0.81
CTSA-207ENST00000484855 CHMP5Q9NZZ3 219 aa20.14■□□□□ 0.81
CTSA-207ENST00000484855 SNX14Q9Y5W7 946 aa20.14■□□□□ 0.81
CTSA-207ENST00000484855 A0A1B0GUL6 1792 aa20.14■□□□□ 0.81
CTSA-207ENST00000484855 PHF14O94880 888 aa20.13■□□□□ 0.81
CTSA-207ENST00000484855 TAF1P21675 1872 aa20.13■□□□□ 0.81
CTSA-207ENST00000484855 GTF2E1P29083 439 aaPredicted RBP20.13■□□□□ 0.81
CTSA-207ENST00000484855 RBM6P78332 1123 aaKnown RBP20.13■□□□□ 0.81
CTSA-207ENST00000484855 NFKBIBQ15653 356 aa20.13■□□□□ 0.81
CTSA-207ENST00000484855 TRIM37O94972 964 aa20.12■□□□□ 0.81
CTSA-207ENST00000484855 TRAPPC3LQ5T215 181 aa20.12■□□□□ 0.81
CTSA-207ENST00000484855 TICAM2Q86XR7 235 aa20.12■□□□□ 0.81
CTSA-207ENST00000484855 RFC4P35249 363 aa20.12■□□□□ 0.81
CTSA-207ENST00000484855 PUM3Q15397 648 aaKnown RBP20.12■□□□□ 0.81
CTSA-207ENST00000484855 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
CTSA-207ENST00000484855 KCNJ4P48050 445 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 FKBP4Q02790 459 aaKnown RBP eCLIP20.11■□□□□ 0.81
CTSA-207ENST00000484855 MAP4K1Q92918 833 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 RBM8AQ9Y5S9 174 aaKnown RBP20.11■□□□□ 0.81
CTSA-207ENST00000484855 COL4A1P02462 1669 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 DDIT3P35638 169 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 MCM2P49736 904 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
CTSA-207ENST00000484855 NBPF5PQ86XG9 351 aaPredicted RBP20.11■□□□□ 0.81
CTSA-207ENST00000484855 RASEFQ8IZ41 740 aa20.11■□□□□ 0.81
CTSA-207ENST00000484855 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
CTSA-207ENST00000484855 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
CTSA-207ENST00000484855 HELBQ8NG08 1087 aaPredicted RBP20.1■□□□□ 0.81
CTSA-207ENST00000484855 LPIN2Q92539 896 aa20.1■□□□□ 0.81
CTSA-207ENST00000484855 UPF3BQ9BZI7 483 aaKnown RBP20.1■□□□□ 0.81
CTSA-207ENST00000484855 CHGBP05060 677 aa20.1■□□□□ 0.81
CTSA-207ENST00000484855 MCMDC2Q4G0Z9 681 aa20.1■□□□□ 0.81
CTSA-207ENST00000484855 C3orf67Q6ZVT6 689 aa20.1■□□□□ 0.81
CTSA-207ENST00000484855 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
CTSA-207ENST00000484855 ADRA2BP18089 450 aa20.09■□□□□ 0.81
CTSA-207ENST00000484855 FGFR2P21802 821 aa20.09■□□□□ 0.81
CTSA-207ENST00000484855 SCARF1Q14162 830 aa20.09■□□□□ 0.81
CTSA-207ENST00000484855 NECTIN1Q15223 517 aa20.09■□□□□ 0.81
CTSA-207ENST00000484855 SLC10A5Q5PT55 438 aa20.09■□□□□ 0.81
CTSA-207ENST00000484855 KCNB2Q92953 911 aa20.09■□□□□ 0.81
CTSA-207ENST00000484855 SLC5A1P13866 664 aa20.08■□□□□ 0.81
CTSA-207ENST00000484855 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.81
CTSA-207ENST00000484855 MYO5AQ9Y4I1 1855 aaKnown RBP20.08■□□□□ 0.8
CTSA-207ENST00000484855 TAF5LO75529 589 aa20.08■□□□□ 0.8
CTSA-207ENST00000484855 CREB3L3Q68CJ9 461 aa20.08■□□□□ 0.8
CTSA-207ENST00000484855 ZNF512BQ96KM6 892 aaPredicted RBP20.08■□□□□ 0.8
CTSA-207ENST00000484855 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.8
CTSA-207ENST00000484855 HELLSQ9NRZ9 838 aa20.08■□□□□ 0.8
CTSA-207ENST00000484855 ZKSCAN1P17029 563 aaPredicted RBP20.07■□□□□ 0.8
CTSA-207ENST00000484855 ZAP70P43403 619 aa20.07■□□□□ 0.8
CTSA-207ENST00000484855 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
CTSA-207ENST00000484855 TPTE2Q6XPS3 522 aa20.07■□□□□ 0.8
CTSA-207ENST00000484855 CCDC129Q6ZRS4 1044 aa20.07■□□□□ 0.8
CTSA-207ENST00000484855 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
CTSA-207ENST00000484855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
CTSA-207ENST00000484855 RNF113AO15541 343 aaKnown RBP20.07■□□□□ 0.8
CTSA-207ENST00000484855 MCAMP43121 646 aa20.07■□□□□ 0.8
CTSA-207ENST00000484855 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
CTSA-207ENST00000484855 CARMIL3Q8ND23 1372 aa20.06■□□□□ 0.8
CTSA-207ENST00000484855 SSFA2P28290 1259 aa20.06■□□□□ 0.8
CTSA-207ENST00000484855 ZMYM1Q5SVZ6 1142 aa20.06■□□□□ 0.8
CTSA-207ENST00000484855 RNF20Q5VTR2 975 aa20.06■□□□□ 0.8
CTSA-207ENST00000484855 CCDC102BQ68D86 513 aa20.06■□□□□ 0.8
CTSA-207ENST00000484855 SLC27A2O14975 620 aa20.05■□□□□ 0.8
CTSA-207ENST00000484855 FRAT2O75474 233 aaPredicted RBP20.05■□□□□ 0.8
CTSA-207ENST00000484855 ARID4AP29374 1257 aaPredicted RBP20.05■□□□□ 0.8
CTSA-207ENST00000484855 CHRNDQ07001 517 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms