RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
SRSF6-202ENST00000483871 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
SRSF6-202ENST00000483871 G3BP1Q13283 466 aaKnown RBP eCLIP17.52■□□□□ 0.4
SRSF6-202ENST00000483871 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
SRSF6-202ENST00000483871 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
SRSF6-202ENST00000483871 MINPP1Q9UNW1 487 aa17.52■□□□□ 0.4
SRSF6-202ENST00000483871 DLEC1Q9Y238 1755 aa17.52■□□□□ 0.39
SRSF6-202ENST00000483871 SASH1O94885 1247 aa17.52■□□□□ 0.39
SRSF6-202ENST00000483871 C7orf43Q8WVR3 580 aa17.52■□□□□ 0.39
SRSF6-202ENST00000483871 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.39
SRSF6-202ENST00000483871 BCS1LQ9Y276 419 aa17.52■□□□□ 0.39
SRSF6-202ENST00000483871 C21orf2O43822 256 aa17.51■□□□□ 0.39
SRSF6-202ENST00000483871 TAF5LO75529 589 aa17.51■□□□□ 0.39
SRSF6-202ENST00000483871 CHRNDQ07001 517 aa17.51■□□□□ 0.39
SRSF6-202ENST00000483871 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
SRSF6-202ENST00000483871 DALRD3Q5D0E6 543 aaKnown RBP17.51■□□□□ 0.39
SRSF6-202ENST00000483871 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
SRSF6-202ENST00000483871 LRP5O75197 1615 aa17.51■□□□□ 0.39
SRSF6-202ENST00000483871 WTIPA6NIX2 430 aaPredicted RBP17.5■□□□□ 0.39
SRSF6-202ENST00000483871 SNAP23O00161 211 aa17.5■□□□□ 0.39
SRSF6-202ENST00000483871 SP8Q8IXZ3 490 aa17.5■□□□□ 0.39
SRSF6-202ENST00000483871 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
SRSF6-202ENST00000483871 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
SRSF6-202ENST00000483871 CIAO1O76071 339 aa17.49■□□□□ 0.39
SRSF6-202ENST00000483871 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
SRSF6-202ENST00000483871 TFCP2Q12800 502 aa17.49■□□□□ 0.39
SRSF6-202ENST00000483871 METTL24Q5JXM2 366 aa17.48■□□□□ 0.39
SRSF6-202ENST00000483871 FBXO3Q9UK99 471 aa17.48■□□□□ 0.39
SRSF6-202ENST00000483871 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
SRSF6-202ENST00000483871 SMARCA5O60264 1052 aaPredicted RBP17.48■□□□□ 0.39
SRSF6-202ENST00000483871 GPSM2P81274 684 aa17.48■□□□□ 0.39
SRSF6-202ENST00000483871 TMC4Q7Z404 712 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 IL1RAPL2Q9NP60 686 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 CEP126Q9P2H0 1117 aa17.47■□□□□ 0.39
SRSF6-202ENST00000483871 MROH5Q6ZUA9 1318 aa17.46■□□□□ 0.39
SRSF6-202ENST00000483871 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
SRSF6-202ENST00000483871 RAB11FIP3O75154 756 aa17.46■□□□□ 0.39
SRSF6-202ENST00000483871 PDE8BO95263 885 aa17.46■□□□□ 0.39
SRSF6-202ENST00000483871 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
SRSF6-202ENST00000483871 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
SRSF6-202ENST00000483871 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
SRSF6-202ENST00000483871 MPNDQ8N594 471 aa17.45■□□□□ 0.38
SRSF6-202ENST00000483871 KIF1BPQ96EK5 621 aa17.45■□□□□ 0.38
SRSF6-202ENST00000483871 GPR101Q96P66 508 aaPredicted RBP17.45■□□□□ 0.38
SRSF6-202ENST00000483871 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
SRSF6-202ENST00000483871 TMX4Q9H1E5 349 aaPredicted RBP17.45■□□□□ 0.38
SRSF6-202ENST00000483871 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
SRSF6-202ENST00000483871 TIMM10P62072 90 aa17.44■□□□□ 0.38
SRSF6-202ENST00000483871 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
SRSF6-202ENST00000483871 ANKRD2Q9GZV1 360 aa17.44■□□□□ 0.38
SRSF6-202ENST00000483871 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
SRSF6-202ENST00000483871 XDHP47989 1333 aa17.43■□□□□ 0.38
SRSF6-202ENST00000483871 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
SRSF6-202ENST00000483871 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
SRSF6-202ENST00000483871 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
SRSF6-202ENST00000483871 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 CCDC93Q567U6 631 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 TBC1D16Q8TBP0 767 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 EAF2Q96CJ1 260 aaPredicted RBP17.42■□□□□ 0.38
SRSF6-202ENST00000483871 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 UFL1O94874 794 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 FGFR2P21802 821 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 KLRK1P26718 216 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 CC2D2BQ6DHV5 1058 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
SRSF6-202ENST00000483871 NEUROD6Q96NK8 337 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 CCDC8Q9H0W5 538 aaPredicted RBP17.42■□□□□ 0.38
SRSF6-202ENST00000483871 GGA1Q9UJY5 639 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
SRSF6-202ENST00000483871 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 ZNF804BA4D1E1 1349 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 A0A1B0GUL6 1792 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 KCNJ4P48050 445 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 TXNRD3Q86VQ6 643 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 LEMD3Q9Y2U8 911 aa17.41■□□□□ 0.38
SRSF6-202ENST00000483871 ATP2B4P23634 1241 aa17.4■□□□□ 0.38
SRSF6-202ENST00000483871 NUCB1Q02818 461 aa17.4■□□□□ 0.38
SRSF6-202ENST00000483871 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
SRSF6-202ENST00000483871 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
SRSF6-202ENST00000483871 RTKN2Q8IZC4 609 aa17.4■□□□□ 0.38
SRSF6-202ENST00000483871 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
SRSF6-202ENST00000483871 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
SRSF6-202ENST00000483871 NFKBIEO00221 500 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 ADORA1P30542 326 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 AACSQ86V21 672 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 LPIN2Q92539 896 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 GPR108Q9NPR9 543 aa17.39■□□□□ 0.37
SRSF6-202ENST00000483871 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms