RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 LAMB4A4D0S4 1761 aa9.87□□□□□ -0.83
SORT1-205ENST00000483508 DICER1Q9UPY3 1922 aaKnown RBP9.87□□□□□ -0.83
SORT1-205ENST00000483508 FER1L6Q2WGJ9 1857 aa9.87□□□□□ -0.83
SORT1-205ENST00000483508 BAG4O95429 457 aaKnown RBP9.86□□□□□ -0.83
SORT1-205ENST00000483508 HSPA1AP0DMV8 641 aaKnown RBP9.86□□□□□ -0.83
SORT1-205ENST00000483508 HSPA1BP0DMV9 641 aaKnown RBP9.86□□□□□ -0.83
SORT1-205ENST00000483508 COL11A2P13942 1736 aaPredicted RBP9.86□□□□□ -0.83
SORT1-205ENST00000483508 MX1P20591 662 aa9.86□□□□□ -0.83
SORT1-205ENST00000483508 ALDH1B1P30837 517 aa9.86□□□□□ -0.83
SORT1-205ENST00000483508 EAPPQ56P03 285 aaPredicted RBP9.86□□□□□ -0.83
SORT1-205ENST00000483508 RTKN2Q8IZC4 609 aa9.86□□□□□ -0.83
SORT1-205ENST00000483508 ESYT1Q9BSJ8 1104 aa9.86□□□□□ -0.83
SORT1-205ENST00000483508 SLX4Q8IY92 1834 aa9.86□□□□□ -0.83
SORT1-205ENST00000483508 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
SORT1-205ENST00000483508 POTECB2RU33 542 aa9.85□□□□□ -0.83
SORT1-205ENST00000483508 UBTFL1P0CB47 393 aaPredicted RBP9.85□□□□□ -0.83
SORT1-205ENST00000483508 FKBP4Q02790 459 aaKnown RBP eCLIP9.85□□□□□ -0.83
SORT1-205ENST00000483508 HDGFL1Q5TGJ6 251 aa9.85□□□□□ -0.83
SORT1-205ENST00000483508 KIF6Q6ZMV9 814 aa9.85□□□□□ -0.83
SORT1-205ENST00000483508 SSH3Q8TE77 659 aa9.85□□□□□ -0.83
SORT1-205ENST00000483508 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
SORT1-205ENST00000483508 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
SORT1-205ENST00000483508 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
SORT1-205ENST00000483508 HDAC5Q9UQL6 1122 aa9.85□□□□□ -0.83
SORT1-205ENST00000483508 APBB1O00213 710 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 HSP90AB4PQ58FF6 505 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 LDHDQ86WU2 507 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 JDP2Q8WYK2 163 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 RPGRQ92834 1020 aaKnown RBP9.84□□□□□ -0.83
SORT1-205ENST00000483508 ZNF277Q9NRM2 450 aaPredicted RBP9.84□□□□□ -0.83
SORT1-205ENST00000483508 CREBZFQ9NS37 354 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 EXOC6BQ9Y2D4 811 aa9.84□□□□□ -0.83
SORT1-205ENST00000483508 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 RGL2O15211 777 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 MYL6BP14649 208 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 CHMLP26374 656 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 ZNF445P59923 1031 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 POLA2Q14181 598 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 HLFQ16534 295 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
SORT1-205ENST00000483508 SYNE4Q8N205 404 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 NBPF15Q8N660 670 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 HACL1Q9UJ83 578 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 LRRFIP2Q9Y608 721 aaKnown RBP9.83□□□□□ -0.84
SORT1-205ENST00000483508 DDX49Q9Y6V7 483 aaKnown RBP9.83□□□□□ -0.84
SORT1-205ENST00000483508 ARFGEF2Q9Y6D5 1785 aa9.83□□□□□ -0.84
SORT1-205ENST00000483508 CEP350Q5VT06 3117 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 PNMA6EA0A0J9YXQ4 647 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 POTEIP0CG38 1075 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 POTEJP0CG39 1038 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
SORT1-205ENST00000483508 EIF6P56537 245 aaKnown RBP9.82□□□□□ -0.84
SORT1-205ENST00000483508 EIF4A1P60842 406 aaKnown RBP9.82□□□□□ -0.84
SORT1-205ENST00000483508 CUL4AQ13619 759 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 NUTM1Q86Y26 1132 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 AIDAQ96BJ3 306 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 INTS4Q96HW7 963 aaKnown RBP9.82□□□□□ -0.84
SORT1-205ENST00000483508 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
SORT1-205ENST00000483508 TAF1DQ9H5J8 278 aaPredicted RBP9.82□□□□□ -0.84
SORT1-205ENST00000483508 ERVV-1B6SEH8 477 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 NPM3O75607 178 aaKnown RBP9.81□□□□□ -0.84
SORT1-205ENST00000483508 GPTP24298 496 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
SORT1-205ENST00000483508 EPHX2P34913 555 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 CLCN1P35523 988 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 CCDC173Q0VFZ6 552 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 PNMA8AQ86V59 439 aaPredicted RBP9.81□□□□□ -0.84
SORT1-205ENST00000483508 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 ANP32BQ92688 251 aaKnown RBP9.81□□□□□ -0.84
SORT1-205ENST00000483508 KIF1BPQ96EK5 621 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 RBM17Q96I25 401 aaKnown RBP9.81□□□□□ -0.84
SORT1-205ENST00000483508 PANK2Q9BZ23 570 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 GJA3Q9Y6H8 435 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 SCN4AP35499 1836 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 MAP3K15Q6ZN16 1313 aa9.81□□□□□ -0.84
SORT1-205ENST00000483508 KLRG2A4D1S0 409 aaPredicted RBP9.8□□□□□ -0.84
SORT1-205ENST00000483508 TMEM88BA6NKF7 163 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 ALDH1L1O75891 902 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 MBD3O95983 291 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 NEK4P51957 841 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 CC2D2BQ6DHV5 1058 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 OLFM4Q6UX06 510 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 PPP1R42Q7Z4L9 355 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 DNAAF4Q8WXU2 420 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 RILPL2Q969X0 211 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 TRIM44Q96DX7 344 aaPredicted RBP9.8□□□□□ -0.84
SORT1-205ENST00000483508 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
SORT1-205ENST00000483508 ZBTB3Q9H5J0 574 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 RRAGDQ9NQL2 400 aaPredicted RBP9.8□□□□□ -0.84
SORT1-205ENST00000483508 LMBRD1Q9NUN5 540 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 TTC41PQ6P2S7 1318 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 ZNF541Q9H0D2 1346 aa9.8□□□□□ -0.84
SORT1-205ENST00000483508 EIF2S2P20042 333 aaKnown RBP9.79□□□□□ -0.84
SORT1-205ENST00000483508 MTX1Q13505 466 aa9.79□□□□□ -0.84
SORT1-205ENST00000483508 GRIPAP1Q4V328 841 aa9.79□□□□□ -0.84
SORT1-205ENST00000483508 BEND3Q5T5X7 828 aa9.79□□□□□ -0.84
SORT1-205ENST00000483508 TTLL7Q6ZT98 887 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms