RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.4
NDC1-202ENST00000480952 HDAC9Q9UKV0 1011 aa17.52■□□□□ 0.4
NDC1-202ENST00000480952 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
NDC1-202ENST00000480952 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
NDC1-202ENST00000480952 RASAL3Q86YV0 1011 aa17.51■□□□□ 0.39
NDC1-202ENST00000480952 TBC1D16Q8TBP0 767 aa17.51■□□□□ 0.39
NDC1-202ENST00000480952 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
NDC1-202ENST00000480952 SCARF1Q14162 830 aa17.5■□□□□ 0.39
NDC1-202ENST00000480952 ANGEL2Q5VTE6 544 aaKnown RBP17.5■□□□□ 0.39
NDC1-202ENST00000480952 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
NDC1-202ENST00000480952 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
NDC1-202ENST00000480952 FKBP1BP68106 108 aa17.49■□□□□ 0.39
NDC1-202ENST00000480952 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
NDC1-202ENST00000480952 LAMB2P55268 1798 aa17.48■□□□□ 0.39
NDC1-202ENST00000480952 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
NDC1-202ENST00000480952 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
NDC1-202ENST00000480952 ANKRD13DQ6ZTN6 518 aa17.48■□□□□ 0.39
NDC1-202ENST00000480952 PLBD2Q8NHP8 589 aa17.48■□□□□ 0.39
NDC1-202ENST00000480952 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
NDC1-202ENST00000480952 ZNF280AP59817 542 aaPredicted RBP17.47■□□□□ 0.39
NDC1-202ENST00000480952 AGBL3Q8NEM8 1001 aa17.47■□□□□ 0.39
NDC1-202ENST00000480952 ZNF296Q8WUU4 475 aaPredicted RBP17.47■□□□□ 0.39
NDC1-202ENST00000480952 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
NDC1-202ENST00000480952 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
NDC1-202ENST00000480952 TAF1P21675 1872 aa17.46■□□□□ 0.39
NDC1-202ENST00000480952 IRS4O14654 1257 aaPredicted RBP17.46■□□□□ 0.39
NDC1-202ENST00000480952 UFL1O94874 794 aa17.46■□□□□ 0.39
NDC1-202ENST00000480952 LMOD3Q0VAK6 560 aa17.46■□□□□ 0.39
NDC1-202ENST00000480952 RSBN1LQ6PCB5 846 aaPredicted RBP17.46■□□□□ 0.39
NDC1-202ENST00000480952 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
NDC1-202ENST00000480952 POLR2AP24928 1970 aaKnown RBP17.46■□□□□ 0.39
NDC1-202ENST00000480952 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 UBE2Q2LH0YL09 131 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 USP17L8P0C7I0 530 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 KRT24Q2M2I5 525 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 MOB2Q70IA6 237 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 GGA1Q9UJY5 639 aa17.45■□□□□ 0.38
NDC1-202ENST00000480952 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
NDC1-202ENST00000480952 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
NDC1-202ENST00000480952 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
NDC1-202ENST00000480952 SCAF8Q9UPN6 1271 aaKnown RBP17.44■□□□□ 0.38
NDC1-202ENST00000480952 LAS1LQ9Y4W2 734 aaKnown RBP17.44■□□□□ 0.38
NDC1-202ENST00000480952 GPR25O00155 361 aa17.43■□□□□ 0.38
NDC1-202ENST00000480952 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
NDC1-202ENST00000480952 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
NDC1-202ENST00000480952 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
NDC1-202ENST00000480952 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
NDC1-202ENST00000480952 CHL1O00533 1208 aa17.42■□□□□ 0.38
NDC1-202ENST00000480952 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
NDC1-202ENST00000480952 TM4SF4P48230 202 aa17.42■□□□□ 0.38
NDC1-202ENST00000480952 PRAMEF18Q5VWM3 479 aa17.42■□□□□ 0.38
NDC1-202ENST00000480952 FBXO46Q6PJ61 603 aaPredicted RBP17.42■□□□□ 0.38
NDC1-202ENST00000480952 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
NDC1-202ENST00000480952 MKRN3Q13064 507 aaKnown RBP17.41■□□□□ 0.38
NDC1-202ENST00000480952 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
NDC1-202ENST00000480952 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
NDC1-202ENST00000480952 GMLQ99445 158 aa17.41■□□□□ 0.38
NDC1-202ENST00000480952 USP17L3A6NCW0 530 aa17.4■□□□□ 0.38
NDC1-202ENST00000480952 USP17L4A6NCW7 530 aa17.4■□□□□ 0.38
NDC1-202ENST00000480952 NF2P35240 595 aa17.4■□□□□ 0.38
NDC1-202ENST00000480952 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
NDC1-202ENST00000480952 USP17L1Q7RTZ2 530 aa17.4■□□□□ 0.38
NDC1-202ENST00000480952 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
NDC1-202ENST00000480952 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
NDC1-202ENST00000480952 PAPPA2Q9BXP8 1791 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 FKTNO75072 461 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 SREBF2Q12772 1141 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 CCDC152Q4G0S7 254 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 COL4A1P02462 1669 aa17.39■□□□□ 0.37
NDC1-202ENST00000480952 ZNF609O15014 1411 aa17.38■□□□□ 0.37
NDC1-202ENST00000480952 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
NDC1-202ENST00000480952 HOXB7P09629 217 aa17.38■□□□□ 0.37
NDC1-202ENST00000480952 NBPF9Q3BBW0 867 aa17.38■□□□□ 0.37
NDC1-202ENST00000480952 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
NDC1-202ENST00000480952 CCDC85AQ96PX6 553 aaPredicted RBP17.38■□□□□ 0.37
NDC1-202ENST00000480952 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
NDC1-202ENST00000480952 XDHP47989 1333 aa17.37■□□□□ 0.37
NDC1-202ENST00000480952 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
NDC1-202ENST00000480952 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
NDC1-202ENST00000480952 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
NDC1-202ENST00000480952 PDE8AO60658 829 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 PTPN12Q05209 780 aaKnown RBP17.35■□□□□ 0.37
NDC1-202ENST00000480952 PRKG1Q13976 671 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 ARMC9Q7Z3E5 817 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 FBXW7Q969H0 707 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 R3HDMLQ9H3Y0 253 aa17.35■□□□□ 0.37
NDC1-202ENST00000480952 WNT10BO00744 389 aa17.34■□□□□ 0.37
NDC1-202ENST00000480952 HABP4Q5JVS0 413 aaKnown RBP17.34■□□□□ 0.37
NDC1-202ENST00000480952 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
NDC1-202ENST00000480952 MYD88Q99836 296 aa17.34■□□□□ 0.37
NDC1-202ENST00000480952 MXD3Q9BW11 206 aa17.34■□□□□ 0.37
NDC1-202ENST00000480952 CFHR5Q9BXR6 569 aa17.34■□□□□ 0.37
NDC1-202ENST00000480952 ALDH1A1P00352 501 aa17.33■□□□□ 0.36
NDC1-202ENST00000480952 PCCAP05165 728 aaPredicted RBP17.33■□□□□ 0.36
NDC1-202ENST00000480952 DACT2Q5SW24 774 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms