RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 SH3TC1Q8TE82 1336 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 EGFRP00533 1210 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 CT47B1P0C2W7 299 aaPredicted RBP11.53□□□□□ -0.56
VCP-206ENST00000480327 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
VCP-206ENST00000480327 GRM1Q13255 1194 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 FKBP5Q13451 457 aaPredicted RBP11.53□□□□□ -0.56
VCP-206ENST00000480327 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 SUPT20HQ8NEM7 779 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 PLBD2Q8NHP8 589 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 ZIC5Q96T25 663 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 KCNQ5Q9NR82 932 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
VCP-206ENST00000480327 CDHR2Q9BYE9 1310 aa11.53□□□□□ -0.56
VCP-206ENST00000480327 MYH3P11055 1940 aa11.52□□□□□ -0.56
VCP-206ENST00000480327 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 F6X3S4 739 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 BCAR3O75815 825 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
VCP-206ENST00000480327 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.57
VCP-206ENST00000480327 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
VCP-206ENST00000480327 DDX46Q7L014 1031 aaKnown RBP11.52□□□□□ -0.57
VCP-206ENST00000480327 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 CNOT7Q9UIV1 285 aaKnown RBP11.52□□□□□ -0.57
VCP-206ENST00000480327 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 RTL9Q8NET4 1388 aa11.52□□□□□ -0.57
VCP-206ENST00000480327 ATP5J2-PTCD1G3V325 749 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 PSMD14O00487 310 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 ECE1P42892 770 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 GPSM2P81274 684 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
VCP-206ENST00000480327 KSR2Q6VAB6 950 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
VCP-206ENST00000480327 MYD88Q99836 296 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 POLLQ9UGP5 575 aa11.51□□□□□ -0.57
VCP-206ENST00000480327 NOB1Q9ULX3 412 aaKnown RBP11.51□□□□□ -0.57
VCP-206ENST00000480327 MAP2K2P36507 400 aa11.5□□□□□ -0.57
VCP-206ENST00000480327 TNIP1Q15025 636 aa11.5□□□□□ -0.57
VCP-206ENST00000480327 SAMD7Q7Z3H4 446 aa11.5□□□□□ -0.57
VCP-206ENST00000480327 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
VCP-206ENST00000480327 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
VCP-206ENST00000480327 HHIPL1Q96JK4 782 aa11.5□□□□□ -0.57
VCP-206ENST00000480327 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
VCP-206ENST00000480327 DBNDD1Q9H9R9 158 aa11.5□□□□□ -0.57
VCP-206ENST00000480327 RTL5Q5HYW3 569 aaPredicted RBP11.49□□□□□ -0.57
VCP-206ENST00000480327 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
VCP-206ENST00000480327 TMC4Q7Z404 712 aa11.49□□□□□ -0.57
VCP-206ENST00000480327 USP48Q86UV5 1035 aa11.49□□□□□ -0.57
VCP-206ENST00000480327 DNAAF4Q8WXU2 420 aa11.49□□□□□ -0.57
VCP-206ENST00000480327 METTL22Q9BUU2 404 aaPredicted RBP11.49□□□□□ -0.57
VCP-206ENST00000480327 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
VCP-206ENST00000480327 FAM155AB1AL88 458 aaPredicted RBP11.48□□□□□ -0.57
VCP-206ENST00000480327 RIMBP2O15034 1052 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 TRIM28Q13263 835 aaKnown RBP11.48□□□□□ -0.57
VCP-206ENST00000480327 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 WASHC4Q2M389 1173 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
VCP-206ENST00000480327 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 TBC1D16Q8TBP0 767 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 DPF2Q92785 391 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 JARID2Q92833 1246 aaPredicted RBP11.48□□□□□ -0.57
VCP-206ENST00000480327 SEC31BQ9NQW1 1179 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 RCAN3Q9UKA8 241 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 NSFL1CQ9UNZ2 370 aaKnown RBP11.48□□□□□ -0.57
VCP-206ENST00000480327 TNNQ9UQP3 1299 aa11.48□□□□□ -0.57
VCP-206ENST00000480327 ASTN2O75129 1339 aaPredicted RBP11.48□□□□□ -0.57
VCP-206ENST00000480327 A0A1B0GUL6 1792 aa11.47□□□□□ -0.57
VCP-206ENST00000480327 PTPRCP08575 1304 aa11.47□□□□□ -0.57
VCP-206ENST00000480327 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
VCP-206ENST00000480327 IRS4O14654 1257 aaPredicted RBP11.47□□□□□ -0.57
VCP-206ENST00000480327 ECE2O60344 883 aa11.47□□□□□ -0.57
VCP-206ENST00000480327 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
VCP-206ENST00000480327 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
VCP-206ENST00000480327 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
VCP-206ENST00000480327 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
VCP-206ENST00000480327 ZNF609O15014 1411 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 H7C1D1 291 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 IGKV5-2P06315 115 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 RGS19P49795 217 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 MCOLN1Q9GZU1 580 aa11.46□□□□□ -0.57
VCP-206ENST00000480327 WTIPA6NIX2 430 aaPredicted RBP11.45□□□□□ -0.58
VCP-206ENST00000480327 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
VCP-206ENST00000480327 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
VCP-206ENST00000480327 PLIN1O60240 522 aa11.45□□□□□ -0.58
VCP-206ENST00000480327 HUNKP57058 714 aa11.45□□□□□ -0.58
VCP-206ENST00000480327 RPS8P62241 208 aaKnown RBP11.45□□□□□ -0.58
VCP-206ENST00000480327 BEND3Q5T5X7 828 aa11.45□□□□□ -0.58
VCP-206ENST00000480327 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
VCP-206ENST00000480327 API5Q9BZZ5 524 aaKnown RBP11.45□□□□□ -0.58
VCP-206ENST00000480327 CWC25Q9NXE8 425 aaPredicted RBP11.45□□□□□ -0.58
VCP-206ENST00000480327 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
VCP-206ENST00000480327 CCDC85CA6NKD9 419 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 VIL1P09327 827 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms