RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
EWSR1-216ENST00000479135 NCAPGQ9BPX3 1015 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 TAF12Q16514 161 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 TTC30BQ8N4P2 665 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 DAB2P98082 770 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 NXNQ6DKJ4 435 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 SYNDIG1LA6NDD5 238 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 MCM7P33993 719 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 RASAL2Q9UJF2 1139 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 WDR33Q9C0J8 1336 aaKnown RBP12.44□□□□□ -0.42
EWSR1-216ENST00000479135 COG3Q96JB2 828 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 MYL6BP14649 208 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 PLS1Q14651 629 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
EWSR1-216ENST00000479135 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
EWSR1-216ENST00000479135 CTAGE9A4FU28 777 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
EWSR1-216ENST00000479135 FSCBQ5H9T9 825 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 NR1H4Q96RI1 486 aaPredicted RBP12.44□□□□□ -0.42
EWSR1-216ENST00000479135 SYTL2Q9HCH5 934 aa12.44□□□□□ -0.42
EWSR1-216ENST00000479135 PRXQ9BXM0 1461 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 BAIAP2L1Q9UHR4 511 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
EWSR1-216ENST00000479135 CCDC38Q502W7 563 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 ACBD5Q5T8D3 534 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-216ENST00000479135 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 RFX1P22670 979 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 ERCC6LQ2NKX8 1250 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 USP6NLQ92738 828 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 ARHGAP42A6NI28 874 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
EWSR1-216ENST00000479135 HVCN1Q96D96 273 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 RILPQ96NA2 401 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 TSNAXIP1Q2TAA8 658 aa12.43□□□□□ -0.42
EWSR1-216ENST00000479135 KRT14P02533 472 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 PPP2R5AQ15172 486 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 TTC14Q96N46 770 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 HELLSQ9NRZ9 838 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 KRT9P35527 623 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 HIF1AQ16665 826 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 CCDC14Q49A88 953 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.42□□□□□ -0.42
EWSR1-216ENST00000479135 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
EWSR1-216ENST00000479135 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 ADCY5O95622 1261 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 NPR1P16066 1061 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 SPATS2Q86XZ4 545 aaKnown RBP12.42□□□□□ -0.42
EWSR1-216ENST00000479135 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
EWSR1-216ENST00000479135 E7EVH7 732 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 CCDC159P0C7I6 412 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 NBPF8Q3BBV2 869 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 C4orf50Q6ZRC1 276 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
EWSR1-216ENST00000479135 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
EWSR1-216ENST00000479135 K7ELQ4 463 aaPredicted RBP12.41□□□□□ -0.42
EWSR1-216ENST00000479135 CRACR2BQ8N4Y2 399 aaPredicted RBP12.41□□□□□ -0.42
EWSR1-216ENST00000479135 GTPBP10A4D1E9 387 aaKnown RBP12.41□□□□□ -0.42
EWSR1-216ENST00000479135 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 LZTFL1Q9NQ48 299 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 ESYT2A0FGR8 921 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 CEP131Q9UPN4 1083 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
EWSR1-216ENST00000479135 HLA-DPA1P20036 260 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 EP400NLQ6ZTU2 488 aa12.41□□□□□ -0.42
EWSR1-216ENST00000479135 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
EWSR1-216ENST00000479135 UTP14AQ9BVJ6 771 aaKnown RBP12.41□□□□□ -0.42
EWSR1-216ENST00000479135 CTAGE15A4D2H0 777 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 TRPA1O75762 1119 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
EWSR1-216ENST00000479135 MCM10Q7L590 875 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 SELENOOQ9BVL4 669 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 PANK3Q9H999 370 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.42
EWSR1-216ENST00000479135 LRP2BPQ9P2M1 347 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 ALDH3A1P30838 453 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 INF2Q27J81 1249 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 CEP19Q96LK0 163 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 ABCF3Q9NUQ8 709 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 CCT2P78371 535 aaKnown RBP12.4□□□□□ -0.42
EWSR1-216ENST00000479135 RASIP1Q5U651 963 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 SPATS2LQ9NUQ6 558 aaKnown RBP12.4□□□□□ -0.42
EWSR1-216ENST00000479135 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
EWSR1-216ENST00000479135 NFE2L2Q16236 605 aa12.4□□□□□ -0.43
EWSR1-216ENST00000479135 CCDC62Q6P9F0 684 aa12.4□□□□□ -0.43
EWSR1-216ENST00000479135 GIPC1O14908 333 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 FYB2Q5VWT5 728 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms