RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 DBN1Q16643 649 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 MRRFQ96E11 262 aaKnown RBP9.31□□□□□ -0.92
SSR3-207ENST00000478842 CSRNP1Q96S65 589 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 ELP3Q9H9T3 547 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 PHLDB1Q86UU1 1377 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 PTPRMP28827 1452 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 UNCXA6NJT0 531 aa9.3□□□□□ -0.92
SSR3-207ENST00000478842 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
SSR3-207ENST00000478842 UBAP2LQ14157 1087 aaKnown RBP9.3□□□□□ -0.92
SSR3-207ENST00000478842 NLRP13Q86W25 1043 aa9.3□□□□□ -0.92
SSR3-207ENST00000478842 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
SSR3-207ENST00000478842 ATXN7L1Q9ULK2 861 aaPredicted RBP9.3□□□□□ -0.92
SSR3-207ENST00000478842 RAPGEF2Q9Y4G8 1499 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 DCDC2BA2VCK2 349 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 A6NHS1 94 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 EIF1AYO14602 144 aaKnown RBP9.29□□□□□ -0.92
SSR3-207ENST00000478842 CPNE3O75131 537 aaKnown RBP9.29□□□□□ -0.92
SSR3-207ENST00000478842 THBS1P07996 1170 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
SSR3-207ENST00000478842 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
SSR3-207ENST00000478842 VAMP1P23763 118 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
SSR3-207ENST00000478842 CCINQ13939 588 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 PMEPA1Q969W9 287 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 TRERF1Q96PN7 1200 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 MARK1Q9P0L2 795 aa9.29□□□□□ -0.92
SSR3-207ENST00000478842 BNIP3LO60238 219 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 PHACTR2O75167 634 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 ORC1Q13415 861 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
SSR3-207ENST00000478842 FRMD6Q96NE9 622 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
SSR3-207ENST00000478842 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
SSR3-207ENST00000478842 ABCA8O94911 1581 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 PCF11O94913 1555 aaKnown RBP9.28□□□□□ -0.92
SSR3-207ENST00000478842 GOLGA3Q08378 1498 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
SSR3-207ENST00000478842 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
SSR3-207ENST00000478842 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
SSR3-207ENST00000478842 GSX2Q9BZM3 304 aa9.27□□□□□ -0.93
SSR3-207ENST00000478842 BCORL1Q5H9F3 1711 aa9.27□□□□□ -0.93
SSR3-207ENST00000478842 TAGLNQ01995 201 aaKnown RBP9.26□□□□□ -0.93
SSR3-207ENST00000478842 FAM182BQ5T319 152 aa9.26□□□□□ -0.93
SSR3-207ENST00000478842 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
SSR3-207ENST00000478842 PNMA5Q96PV4 448 aa9.26□□□□□ -0.93
SSR3-207ENST00000478842 DUSP9Q99956 384 aaKnown RBP9.26□□□□□ -0.93
SSR3-207ENST00000478842 ZFYVE28Q9HCC9 887 aa9.26□□□□□ -0.93
SSR3-207ENST00000478842 TMEM63CQ9P1W3 806 aa9.26□□□□□ -0.93
SSR3-207ENST00000478842 KIAA1522Q9P206 1035 aaPredicted RBP9.26□□□□□ -0.93
SSR3-207ENST00000478842 CTTNBP2Q8WZ74 1663 aa9.26□□□□□ -0.93
SSR3-207ENST00000478842 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
SSR3-207ENST00000478842 TMC4Q7Z404 712 aa9.25□□□□□ -0.93
SSR3-207ENST00000478842 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
SSR3-207ENST00000478842 MRS2Q9HD23 443 aa9.25□□□□□ -0.93
SSR3-207ENST00000478842 FOXD3Q9UJU5 478 aaPredicted RBP9.25□□□□□ -0.93
SSR3-207ENST00000478842 ABCA9Q8IUA7 1624 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 SASH3O75995 380 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 FGFR3P22607 806 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 SPEM2Q0P670 501 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 NANOS1Q8WY41 292 aaKnown RBP9.24□□□□□ -0.93
SSR3-207ENST00000478842 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 SPG7Q9UQ90 795 aa9.24□□□□□ -0.93
SSR3-207ENST00000478842 GIPC1O14908 333 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 MAP3K6O95382 1288 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 RARAP10276 462 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 GNA15P30679 374 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 DAB2P98082 770 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 PSMD2Q13200 908 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 FAM9AQ8IZU1 332 aaPredicted RBP9.23□□□□□ -0.93
SSR3-207ENST00000478842 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 NLRP2Q9NX02 1062 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
SSR3-207ENST00000478842 MADDQ8WXG6 1647 aa9.23□□□□□ -0.93
SSR3-207ENST00000478842 NEO1Q92859 1461 aa9.22□□□□□ -0.93
SSR3-207ENST00000478842 CDC14CA4D256 554 aa9.22□□□□□ -0.93
SSR3-207ENST00000478842 CD33P20138 364 aa9.22□□□□□ -0.93
SSR3-207ENST00000478842 CES1P23141 567 aa9.22□□□□□ -0.93
SSR3-207ENST00000478842 OR13H1Q8NG92 308 aa9.22□□□□□ -0.93
SSR3-207ENST00000478842 PHF20L1A8MW92 1017 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 SORBS3O60504 671 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 PSAPP07602 524 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
SSR3-207ENST00000478842 SOX18P35713 384 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 MRPL58Q14197 206 aaKnown RBP9.21□□□□□ -0.94
SSR3-207ENST00000478842 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 NPAS3Q8IXF0 933 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 VWA5B2Q8N398 1253 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 C1orf127Q8N9H9 656 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 CHRDQ9H2X0 955 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 CNTN3Q9P232 1028 aa9.21□□□□□ -0.94
SSR3-207ENST00000478842 LCE2BO14633 110 aa9.2□□□□□ -0.94
SSR3-207ENST00000478842 MMP20O60882 483 aa9.2□□□□□ -0.94
SSR3-207ENST00000478842 EDN3P14138 238 aa9.2□□□□□ -0.94
SSR3-207ENST00000478842 NFKB1P19838 968 aa9.2□□□□□ -0.94
SSR3-207ENST00000478842 GALNT12Q8IXK2 581 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms