RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ABI2Q9NYB9 513 aaPredicted RBP4.9□□□□□ -1.63
FNDC3B-209ENST00000478016 STK17AQ9UEE5 414 aa4.9□□□□□ -1.63
FNDC3B-209ENST00000478016 MAFGO15525 162 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 HOXD8P13378 290 aaPredicted RBP4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 NCLP19338 710 aaKnown RBP4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 NRLP54845 237 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 GPLD1P80108 840 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 PLAURQ03405 335 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 KANK3Q6NY19 840 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 TMED8Q6PL24 325 aaPredicted RBP4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 CHSY3Q70JA7 882 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 BTBD6Q96KE9 485 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 PRDM16Q9HAZ2 1276 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 DCTN4Q9UJW0 460 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 SLC6A14Q9UN76 642 aa4.89□□□□□ -1.63
FNDC3B-209ENST00000478016 A6NHS1 94 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 CCDC27Q2M243 656 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 SND1Q7KZF4 910 aaKnown RBP eCLIP4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 OR13H1Q8NG92 308 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 TMC1Q8TDI8 760 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 FOXD4L4Q8WXT5 416 aaPredicted RBP4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 RBCK1Q9BYM8 510 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 TMEM63CQ9P1W3 806 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 ADAMTS8Q9UP79 889 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 CADPSQ9ULU8 1353 aa4.88□□□□□ -1.63
FNDC3B-209ENST00000478016 PHF20L1A8MW92 1017 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 TNFRSF21O75509 655 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 MAPK1P28482 360 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 MARSP56192 900 aaKnown RBP4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 HYAL2Q12891 473 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 ERICH6BQ5W0A0 696 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 FAM35AQ86V20 835 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 SNX29Q8TEQ0 813 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 DMRTB1Q96MA1 342 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 NSUN5Q96P11 429 aaKnown RBP4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 FAM129BQ96TA1 746 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 RRAGCQ9HB90 399 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 USP35Q9P2H5 1018 aa4.87□□□□□ -1.63
FNDC3B-209ENST00000478016 LOC102724428A0A0B4J2F2 783 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 ZBTB42B2RXF5 422 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 M0R082 166 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 PHACTR2O75167 634 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 CPB1P15086 417 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 EIF2AK2P19525 551 aaKnown RBP4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 CES1P23141 567 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 DGKGP49619 791 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 SIK1P57059 783 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 MLLT1Q03111 559 aaPredicted RBP4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 PODNQ7Z5L7 613 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 ZNF417Q8TAU3 575 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 PMEPA1Q969W9 287 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 CCDC136Q96JN2 1154 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 ZNF587Q96SQ5 575 aaPredicted RBP4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 RBSNQ9H1K0 784 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 PRDM6Q9NQX0 595 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 FRRS1LQ9P0K9 344 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 CNTN3Q9P232 1028 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 NAGPAQ9UK23 515 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 STARD13Q9Y3M8 1113 aa4.86□□□□□ -1.63
FNDC3B-209ENST00000478016 PIK3R2O00459 728 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 GHRHP01286 108 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 ALBP02768 609 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 CYP2E1P05181 493 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 PSAPL1Q6NUJ1 521 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 ELMSAN1Q6PJG2 1045 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 C20orf204Q6ZNR8 217 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 HFE2Q6ZVN8 426 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 TMC7Q7Z402 723 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 NCAPG2Q86XI2 1143 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 ZSCAN29Q8IWY8 852 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 MICALL1Q8N3F8 863 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 BEND7Q8N7W2 519 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 C1orf127Q8N9H9 656 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 SCARF2Q96GP6 870 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 SPACA7Q96KW9 195 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 PLCD4Q9BRC7 762 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 GZF1Q9H116 711 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 CHRDQ9H2X0 955 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 FOXD3Q9UJU5 478 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 MKL2Q9ULH7 1088 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 AMOTL2Q9Y2J4 779 aa4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 ARID4BQ4LE39 1312 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-209ENST00000478016 J3QW42 95 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 GPR182O15218 404 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 PPM1GO15355 546 aaPredicted RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 LILRB5O75023 590 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 RGS9O75916 674 aaPredicted RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 KIF4AO95239 1232 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 IGHA2P01877 340 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 HOXB4P17483 251 aaPredicted RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 MCCP23508 829 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 SNRPNP63162 240 aaKnown RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 IRX6P78412 446 aaPredicted RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 PERM1Q5SV97 790 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 COL13A1Q5TAT6 717 aaPredicted RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 NUDT8Q8WV74 236 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 ALKBH8Q96BT7 664 aaKnown RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 PLD4Q96BZ4 506 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 LPIN3Q9BQK8 851 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms