RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 GPR108Q9NPR9 543 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 TJP1Q07157 1748 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 LETM1O95202 739 aaPredicted RBP24.6■■□□□ 1.53
TMED4-204ENST00000477639 CHGBP05060 677 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 CSPP1Q1MSJ5 1256 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 MCMDC2Q4G0Z9 681 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 NOL7Q9UMY1 257 aaKnown RBP24.6■■□□□ 1.53
TMED4-204ENST00000477639 U3KPZ7 1027 aaPredicted RBP24.6■■□□□ 1.53
TMED4-204ENST00000477639 VPS37CA5D8V6 355 aaPredicted RBP24.59■■□□□ 1.53
TMED4-204ENST00000477639 LARP1BQ659C4 914 aaKnown RBP24.59■■□□□ 1.53
TMED4-204ENST00000477639 CARD10Q9BWT7 1032 aa24.59■■□□□ 1.53
TMED4-204ENST00000477639 TNS2Q63HR2 1409 aa24.58■■□□□ 1.53
TMED4-204ENST00000477639 CCDC129Q6ZRS4 1044 aa24.58■■□□□ 1.53
TMED4-204ENST00000477639 KBTBD3Q8NAB2 608 aa24.58■■□□□ 1.53
TMED4-204ENST00000477639 CCDC191Q8NCU4 936 aa24.58■■□□□ 1.53
TMED4-204ENST00000477639 NAP1L5Q96NT1 182 aaPredicted RBP24.58■■□□□ 1.53
TMED4-204ENST00000477639 SEC62Q99442 399 aaKnown RBP24.58■■□□□ 1.53
TMED4-204ENST00000477639 CHMP3Q9Y3E7 222 aa24.58■■□□□ 1.53
TMED4-204ENST00000477639 IL2RBP14784 551 aa24.58■■□□□ 1.52
TMED4-204ENST00000477639 DDX46Q7L014 1031 aaKnown RBP24.58■■□□□ 1.52
TMED4-204ENST00000477639 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.58■■□□□ 1.52
TMED4-204ENST00000477639 PDCP20941 246 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 IL15P40933 162 aaPredicted RBP24.56■■□□□ 1.52
TMED4-204ENST00000477639 KLHL34Q8N239 644 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 PALLDQ8WX93 1383 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 MSNP26038 577 aaKnown RBP24.56■■□□□ 1.52
TMED4-204ENST00000477639 FAM184AQ8NB25 1140 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 NEK1Q96PY6 1258 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 ZBTB3Q9H5J0 574 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 SH3TC1Q8TE82 1336 aa24.56■■□□□ 1.52
TMED4-204ENST00000477639 A0A0G2JS52 829 aa24.55■■□□□ 1.52
TMED4-204ENST00000477639 UVSSAQ2YD98 709 aa24.55■■□□□ 1.52
TMED4-204ENST00000477639 TICAM2Q86XR7 235 aa24.55■■□□□ 1.52
TMED4-204ENST00000477639 SHANK3Q9BYB0 1731 aa24.55■■□□□ 1.52
TMED4-204ENST00000477639 CDC37L1Q7L3B6 337 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 EYA2O00167 538 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 CYP21A2P08686 494 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 TIMM10P62072 90 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 FAM98CQ17RN3 349 aaKnown RBP24.54■■□□□ 1.52
TMED4-204ENST00000477639 NEUROD6Q96NK8 337 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 ATG3Q9NT62 314 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 SPATA31A5Q5VU36 1347 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 SPATA31A7Q8IWB4 1347 aa24.54■■□□□ 1.52
TMED4-204ENST00000477639 CIAO1O76071 339 aa24.53■■□□□ 1.52
TMED4-204ENST00000477639 PAG1Q9NWQ8 432 aa24.53■■□□□ 1.52
TMED4-204ENST00000477639 LRRC24Q50LG9 513 aa24.53■■□□□ 1.52
TMED4-204ENST00000477639 ISCA1Q9BUE6 129 aa24.53■■□□□ 1.52
TMED4-204ENST00000477639 HELLSQ9NRZ9 838 aa24.53■■□□□ 1.52
TMED4-204ENST00000477639 CCDC39Q9UFE4 941 aa24.53■■□□□ 1.52
TMED4-204ENST00000477639 ZNF594Q96JF6 807 aaPredicted RBP24.52■■□□□ 1.52
TMED4-204ENST00000477639 FUCA2Q9BTY2 467 aa24.52■■□□□ 1.52
TMED4-204ENST00000477639 GOLIM4O00461 696 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 STK3Q13188 491 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 TPRNQ4KMQ1 711 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 GTF3C6Q969F1 213 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 ZNF500O60304 480 aaPredicted RBP24.51■■□□□ 1.51
TMED4-204ENST00000477639 KRT85P78386 507 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 Q6ZUG5 572 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 SEPT12Q8IYM1 358 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 ZKSCAN5Q9Y2L8 839 aa24.51■■□□□ 1.51
TMED4-204ENST00000477639 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
TMED4-204ENST00000477639 MCM5P33992 734 aa24.5■■□□□ 1.51
TMED4-204ENST00000477639 ZMYM1Q5SVZ6 1142 aa24.5■■□□□ 1.51
TMED4-204ENST00000477639 TTC6Q86TZ1 520 aa24.5■■□□□ 1.51
TMED4-204ENST00000477639 ELP1O95163 1332 aa24.49■■□□□ 1.51
TMED4-204ENST00000477639 OFD1O75665 1012 aa24.49■■□□□ 1.51
TMED4-204ENST00000477639 STOX1Q6ZVD7 989 aa24.49■■□□□ 1.51
TMED4-204ENST00000477639 FERMT3Q86UX7 667 aa24.49■■□□□ 1.51
TMED4-204ENST00000477639 DSCC1Q9BVC3 393 aa24.49■■□□□ 1.51
TMED4-204ENST00000477639 TCIRG1Q13488 830 aa24.48■■□□□ 1.51
TMED4-204ENST00000477639 SLFNL1Q499Z3 407 aa24.48■■□□□ 1.51
TMED4-204ENST00000477639 PUS3Q9BZE2 481 aaKnown RBP24.48■■□□□ 1.51
TMED4-204ENST00000477639 A0A1B0GUL7 405 aa24.47■■□□□ 1.51
TMED4-204ENST00000477639 FAM173BQ6P4H8 233 aa24.47■■□□□ 1.51
TMED4-204ENST00000477639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.47■■□□□ 1.51
TMED4-204ENST00000477639 BRWD3Q6RI45 1802 aa24.47■■□□□ 1.51
TMED4-204ENST00000477639 TOGARAM1Q9Y4F4 1720 aa24.47■■□□□ 1.51
TMED4-204ENST00000477639 TRIM28Q13263 835 aaKnown RBP24.47■■□□□ 1.51
TMED4-204ENST00000477639 GIMAP6Q6P9H5 292 aa24.47■■□□□ 1.51
TMED4-204ENST00000477639 JAK2O60674 1132 aa24.46■■□□□ 1.51
TMED4-204ENST00000477639 IFIT1P09914 478 aaKnown RBP24.46■■□□□ 1.51
TMED4-204ENST00000477639 HCLS1P14317 486 aaPredicted RBP24.46■■□□□ 1.51
TMED4-204ENST00000477639 RNF113AO15541 343 aaKnown RBP24.45■■□□□ 1.51
TMED4-204ENST00000477639 HMGB1P09429 215 aaKnown RBP24.45■■□□□ 1.51
TMED4-204ENST00000477639 ONECUT3O60422 494 aaPredicted RBP24.45■■□□□ 1.5
TMED4-204ENST00000477639 DHX32Q7L7V1 743 aaKnown RBP24.45■■□□□ 1.5
TMED4-204ENST00000477639 TMOD3Q9NYL9 352 aa24.45■■□□□ 1.5
TMED4-204ENST00000477639 CEP126Q9P2H0 1117 aa24.44■■□□□ 1.5
TMED4-204ENST00000477639 SPEF2Q9C093 1822 aa24.44■■□□□ 1.5
TMED4-204ENST00000477639 PFKFB2O60825 505 aa24.43■■□□□ 1.5
TMED4-204ENST00000477639 EXOSC10Q01780 885 aaKnown RBP24.43■■□□□ 1.5
TMED4-204ENST00000477639 BRF1Q92994 677 aa24.43■■□□□ 1.5
TMED4-204ENST00000477639 SCAND2PQ9GZW5 306 aaPredicted RBP24.43■■□□□ 1.5
TMED4-204ENST00000477639 FBXO3Q9UK99 471 aa24.43■■□□□ 1.5
TMED4-204ENST00000477639 MAST3O60307 1309 aa24.43■■□□□ 1.5
TMED4-204ENST00000477639 HSPD1P10809 573 aaKnown RBP24.43■■□□□ 1.5
TMED4-204ENST00000477639 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
TMED4-204ENST00000477639 SMARCC2Q8TAQ2 1214 aa24.43■■□□□ 1.5
TMED4-204ENST00000477639 PLA2G12BQ9BX93 195 aa24.43■■□□□ 1.5
TMED4-204ENST00000477639 PCCAP05165 728 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms