RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ITGA6P23229 1130 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 APLP1P51693 650 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC6-221ENST00000477561 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 PLA2G12BQ9BX93 195 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 C9orf78Q9NZ63 289 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-221ENST00000477561 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 CEP350Q5VT06 3117 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 CACNA1FO60840 1977 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 LRRC37AA6NMS7 1700 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 GRM8O00222 908 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 CSF1RP07333 972 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 LMOD1P29536 600 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-221ENST00000477561 EPS15P42566 896 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 SCNN1DP51172 638 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 FOXO4P98177 505 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 EPHA10Q5JZY3 1008 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 CIAPIN1Q6FI81 312 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 EYA3Q99504 573 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 ZC3H12CQ9C0D7 883 aaKnown RBP10.48□□□□□ -0.73
HDAC6-221ENST00000477561 KCNQ5Q9NR82 932 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 SMC4Q9NTJ3 1288 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 GGA1Q9UJY5 639 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 MINPP1Q9UNW1 487 aa10.48□□□□□ -0.73
HDAC6-221ENST00000477561 G3V3G9 751 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 ECE2O60344 883 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 ALDH1L1O75891 902 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 IGHMBP2P38935 993 aaKnown RBP10.47□□□□□ -0.73
HDAC6-221ENST00000477561 GMPSP49915 693 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-221ENST00000477561 ALDH1L2Q3SY69 923 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 DCAF8Q5TAQ9 597 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 LDHDQ86WU2 507 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 BSDC1Q9NW68 430 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-221ENST00000477561 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-221ENST00000477561 XDHP47989 1333 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 RTL9Q8NET4 1388 aa10.47□□□□□ -0.73
HDAC6-221ENST00000477561 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.73
HDAC6-221ENST00000477561 PSMD14O00487 310 aa10.46□□□□□ -0.73
HDAC6-221ENST00000477561 NBPF7P0C2Y1 421 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-221ENST00000477561 TNIP1Q15025 636 aa10.46□□□□□ -0.73
HDAC6-221ENST00000477561 MAP1SQ66K74 1059 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-221ENST00000477561 PNMA8AQ86V59 439 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-221ENST00000477561 SUCLG2Q96I99 432 aa10.46□□□□□ -0.73
HDAC6-221ENST00000477561 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-221ENST00000477561 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.73
HDAC6-221ENST00000477561 NOB1Q9ULX3 412 aaKnown RBP10.46□□□□□ -0.73
HDAC6-221ENST00000477561 PTPRCP08575 1304 aa10.46□□□□□ -0.73
HDAC6-221ENST00000477561 SCN4AP35499 1836 aa10.46□□□□□ -0.74
HDAC6-221ENST00000477561 LTBP1Q14766 1721 aa10.45□□□□□ -0.74
HDAC6-221ENST00000477561 ZBED9Q6R2W3 1325 aa10.45□□□□□ -0.74
HDAC6-221ENST00000477561 SHTN1A0MZ66 631 aa10.45□□□□□ -0.74
HDAC6-221ENST00000477561 ATP2B4P23634 1241 aa10.45□□□□□ -0.74
HDAC6-221ENST00000477561 CCT4P50991 539 aaKnown RBP10.45□□□□□ -0.74
HDAC6-221ENST00000477561 IFIT5Q13325 482 aaKnown RBP10.45□□□□□ -0.74
HDAC6-221ENST00000477561 GPRC5DQ9NZD1 345 aa10.45□□□□□ -0.74
HDAC6-221ENST00000477561 MYH3P11055 1940 aa10.45□□□□□ -0.74
HDAC6-221ENST00000477561 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 SNAP23O00161 211 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 TAF5LO75529 589 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 CT47B1P0C2W7 299 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-221ENST00000477561 RARSP54136 660 aaKnown RBP10.44□□□□□ -0.74
HDAC6-221ENST00000477561 CCDC57Q2TAC2 916 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 CNTROBQ8N137 903 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 DNAJC5GQ8N7S2 189 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-221ENST00000477561 KAZALD1Q96I82 304 aa10.44□□□□□ -0.74
HDAC6-221ENST00000477561 CNOT7Q9UIV1 285 aaKnown RBP10.44□□□□□ -0.74
HDAC6-221ENST00000477561 PLIN1O60240 522 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 ITGBL1O95965 494 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-221ENST00000477561 KLRK1P26718 216 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 CHRNDQ07001 517 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 TAF7LQ5H9L4 462 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-221ENST00000477561 TXNRD3Q86VQ6 643 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 ANKRD2Q9GZV1 360 aa10.43□□□□□ -0.74
HDAC6-221ENST00000477561 BICC1Q9H694 974 aaKnown RBP10.43□□□□□ -0.74
HDAC6-221ENST00000477561 ADARB2Q9NS39 739 aaKnown RBP10.43□□□□□ -0.74
HDAC6-221ENST00000477561 ZNF804BA4D1E1 1349 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 UTYO14607 1347 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 H7C1D1 291 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 KCNJ4P48050 445 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 HIRAP54198 1017 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-221ENST00000477561 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDAC6-221ENST00000477561 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
HDAC6-221ENST00000477561 LDHAL6AQ6ZMR3 332 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 SAMD7Q7Z3H4 446 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 TRPM4Q8TD43 1214 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 FBXW7Q969H0 707 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 USP44Q9H0E7 712 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 CNNM1Q9NRU3 951 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 LEMD3Q9Y2U8 911 aa10.42□□□□□ -0.74
HDAC6-221ENST00000477561 PASKQ96RG2 1323 aa10.41□□□□□ -0.74
HDAC6-221ENST00000477561 BCAR3O75815 825 aa10.41□□□□□ -0.74
HDAC6-221ENST00000477561 VIL1P09327 827 aaKnown RBP10.41□□□□□ -0.74
HDAC6-221ENST00000477561 TBC1D10BQ4KMP7 808 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms