RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ST7Q9NRC1 585 aa15.34■□□□□ 0.05
CCNL1-216ENST00000475298 FEZ2Q9UHY8 353 aaPredicted RBP15.34■□□□□ 0.05
CCNL1-216ENST00000475298 CYP46A1Q9Y6A2 500 aa15.34■□□□□ 0.05
CCNL1-216ENST00000475298 MRC1P22897 1456 aa15.34■□□□□ 0.05
CCNL1-216ENST00000475298 STX6O43752 255 aa15.34■□□□□ 0.05
CCNL1-216ENST00000475298 ZSCAN22P10073 491 aaPredicted RBP15.34■□□□□ 0.05
CCNL1-216ENST00000475298 PTPN12Q05209 780 aaKnown RBP15.34■□□□□ 0.05
CCNL1-216ENST00000475298 MAP4K1Q92918 833 aa15.34■□□□□ 0.05
CCNL1-216ENST00000475298 DBNLQ9UJU6 430 aaKnown RBP15.34■□□□□ 0.05
CCNL1-216ENST00000475298 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
CCNL1-216ENST00000475298 SPATA31A3Q5VYP0 1347 aa15.34■□□□□ 0.05
CCNL1-216ENST00000475298 A0A087WZG4 1122 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 PTGS1P23219 599 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 VPS53Q5VIR6 699 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 TEX2Q8IWB9 1127 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 KCNB2Q92953 911 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 SLC27A2O14975 620 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 GJB2P29033 226 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 RBM6P78332 1123 aaKnown RBP15.33■□□□□ 0.04
CCNL1-216ENST00000475298 ME3Q16798 604 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
CCNL1-216ENST00000475298 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.33■□□□□ 0.04
CCNL1-216ENST00000475298 PKD1L3Q7Z443 1732 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
CCNL1-216ENST00000475298 FAM193AP78312 1265 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 COPRSQ9NQ92 184 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 GLI3P10071 1580 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
CCNL1-216ENST00000475298 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
CCNL1-216ENST00000475298 TPCN1Q9ULQ1 816 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
CCNL1-216ENST00000475298 DCCP43146 1447 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 TNNT1P13805 278 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 CYP2C19P33261 490 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 HNRNPH2P55795 449 aaKnown RBP15.31■□□□□ 0.04
CCNL1-216ENST00000475298 TM6SF1Q9BZW5 370 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 TSPYL1Q9H0U9 437 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 MED23Q9ULK4 1368 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 HIP1O00291 1037 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 F13A1P00488 732 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 LRMPQ12912 555 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 CCDC112Q8NEF3 446 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 CHMP3Q9Y3E7 222 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 PAXBP1Q9Y5B6 917 aa15.31■□□□□ 0.04
CCNL1-216ENST00000475298 GOLGA6L6A8MZA4 724 aa15.3■□□□□ 0.04
CCNL1-216ENST00000475298 FIBPO43427 364 aa15.3■□□□□ 0.04
CCNL1-216ENST00000475298 RABL6Q3YEC7 729 aaPredicted RBP15.3■□□□□ 0.04
CCNL1-216ENST00000475298 GIMAP6Q6P9H5 292 aa15.3■□□□□ 0.04
CCNL1-216ENST00000475298 LMBR1LQ6UX01 489 aa15.3■□□□□ 0.04
CCNL1-216ENST00000475298 COL15A1P39059 1388 aa15.3■□□□□ 0.04
CCNL1-216ENST00000475298 CASP7P55210 303 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 CCDC129Q6ZRS4 1044 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 SEC62Q99442 399 aaKnown RBP15.29■□□□□ 0.04
CCNL1-216ENST00000475298 A1BGP04217 495 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 PRDM11Q9NQV5 511 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 MTMR6Q9Y217 621 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 ABCC6O95255 1503 aa15.29■□□□□ 0.04
CCNL1-216ENST00000475298 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
CCNL1-216ENST00000475298 FBXO38Q6PIJ6 1188 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 BRINP3Q76B58 766 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 ATP5JP18859 108 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
CCNL1-216ENST00000475298 RAD51AP2Q09MP3 1159 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 ZBTB9Q96C00 473 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 SH2B1Q9NRF2 756 aaPredicted RBP15.28■□□□□ 0.04
CCNL1-216ENST00000475298 ZNF446Q9NWS9 450 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 CPDO75976 1380 aa15.28■□□□□ 0.04
CCNL1-216ENST00000475298 TAF5LO75529 589 aa15.27■□□□□ 0.04
CCNL1-216ENST00000475298 UBE2HP62256 183 aa15.27■□□□□ 0.04
CCNL1-216ENST00000475298 SLFNL1Q499Z3 407 aa15.27■□□□□ 0.04
CCNL1-216ENST00000475298 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.04
CCNL1-216ENST00000475298 ZCRB1Q8TBF4 217 aaKnown RBP15.27■□□□□ 0.04
CCNL1-216ENST00000475298 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
CCNL1-216ENST00000475298 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.04
CCNL1-216ENST00000475298 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
CCNL1-216ENST00000475298 FOXO4P98177 505 aa15.27■□□□□ 0.03
CCNL1-216ENST00000475298 BLOC1S2Q6QNY1 142 aa15.27■□□□□ 0.03
CCNL1-216ENST00000475298 CCDC186Q7Z3E2 898 aa15.27■□□□□ 0.03
CCNL1-216ENST00000475298 SECISBP2LQ93073 1101 aaKnown RBP15.27■□□□□ 0.03
CCNL1-216ENST00000475298 LAMB4A4D0S4 1761 aa15.27■□□□□ 0.03
CCNL1-216ENST00000475298 ZNF609O15014 1411 aa15.27■□□□□ 0.03
CCNL1-216ENST00000475298 STK3Q13188 491 aa15.26■□□□□ 0.03
CCNL1-216ENST00000475298 ZNF215Q9UL58 517 aaPredicted RBP15.26■□□□□ 0.03
CCNL1-216ENST00000475298 RPS6KB1P23443 525 aa15.26■□□□□ 0.03
CCNL1-216ENST00000475298 PSMA5P28066 241 aa15.26■□□□□ 0.03
CCNL1-216ENST00000475298 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
CCNL1-216ENST00000475298 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
CCNL1-216ENST00000475298 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms