RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 ECE2O60344 883 aa13.21□□□□□ -0.29
RAB3GAP2-204ENST00000474178 RPS12P25398 132 aaKnown RBP13.21□□□□□ -0.29
RAB3GAP2-204ENST00000474178 WASHC4Q2M389 1173 aa13.21□□□□□ -0.29
RAB3GAP2-204ENST00000474178 FBXO46Q6PJ61 603 aaPredicted RBP13.21□□□□□ -0.29
RAB3GAP2-204ENST00000474178 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
RAB3GAP2-204ENST00000474178 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
RAB3GAP2-204ENST00000474178 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 GPR25O00155 361 aa13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 GPSM2P81274 684 aa13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
RAB3GAP2-204ENST00000474178 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
RAB3GAP2-204ENST00000474178 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
RAB3GAP2-204ENST00000474178 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
RAB3GAP2-204ENST00000474178 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
RAB3GAP2-204ENST00000474178 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
RAB3GAP2-204ENST00000474178 LAMB1P07942 1786 aa13.18□□□□□ -0.3
RAB3GAP2-204ENST00000474178 UBE2Q2LH0YL09 131 aa13.18□□□□□ -0.3
RAB3GAP2-204ENST00000474178 SCARF1Q14162 830 aa13.18□□□□□ -0.3
RAB3GAP2-204ENST00000474178 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 ZNF609O15014 1411 aa13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 EIF2S2P20042 333 aaKnown RBP13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 TM4SF4P48230 202 aa13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 TMC4Q7Z404 712 aa13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 TRMT112Q9UI30 125 aaKnown RBP13.17□□□□□ -0.3
RAB3GAP2-204ENST00000474178 BRCA2P51587 3418 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 FKBP1BP68106 108 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 TCIRG1Q13488 830 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 HTTP42858 3142 aa13.16□□□□□ -0.3
RAB3GAP2-204ENST00000474178 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
RAB3GAP2-204ENST00000474178 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
RAB3GAP2-204ENST00000474178 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
RAB3GAP2-204ENST00000474178 GMLQ99445 158 aa13.15□□□□□ -0.3
RAB3GAP2-204ENST00000474178 FKTNO75072 461 aa13.14□□□□□ -0.31
RAB3GAP2-204ENST00000474178 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
RAB3GAP2-204ENST00000474178 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
RAB3GAP2-204ENST00000474178 CFHR5Q9BXR6 569 aa13.14□□□□□ -0.31
RAB3GAP2-204ENST00000474178 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
RAB3GAP2-204ENST00000474178 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
RAB3GAP2-204ENST00000474178 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
RAB3GAP2-204ENST00000474178 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
RAB3GAP2-204ENST00000474178 EYA3Q99504 573 aa13.13□□□□□ -0.31
RAB3GAP2-204ENST00000474178 CENPFP49454 3210 aa13.13□□□□□ -0.31
RAB3GAP2-204ENST00000474178 SPEF2Q9C093 1822 aa13.12□□□□□ -0.31
RAB3GAP2-204ENST00000474178 CAP1Q01518 475 aa13.12□□□□□ -0.31
RAB3GAP2-204ENST00000474178 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
RAB3GAP2-204ENST00000474178 AGBL3Q8NEM8 1001 aa13.12□□□□□ -0.31
RAB3GAP2-204ENST00000474178 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
RAB3GAP2-204ENST00000474178 EN2P19622 333 aaPredicted RBP13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
RAB3GAP2-204ENST00000474178 WTIPA6NIX2 430 aaPredicted RBP13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 UFL1O94874 794 aa13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 RTL5Q5HYW3 569 aaPredicted RBP13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 MXD3Q9BW11 206 aa13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
RAB3GAP2-204ENST00000474178 KIAA0100Q14667 2235 aaKnown RBP13.09□□□□□ -0.31
RAB3GAP2-204ENST00000474178 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
RAB3GAP2-204ENST00000474178 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
RAB3GAP2-204ENST00000474178 RPS8P62241 208 aaKnown RBP13.09□□□□□ -0.31
RAB3GAP2-204ENST00000474178 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
RAB3GAP2-204ENST00000474178 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
RAB3GAP2-204ENST00000474178 PRKG1Q13976 671 aa13.08□□□□□ -0.32
RAB3GAP2-204ENST00000474178 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
RAB3GAP2-204ENST00000474178 ZSWIM8A7E2V4 1837 aa13.07□□□□□ -0.32
RAB3GAP2-204ENST00000474178 WNT10BO00744 389 aa13.07□□□□□ -0.32
RAB3GAP2-204ENST00000474178 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
RAB3GAP2-204ENST00000474178 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
RAB3GAP2-204ENST00000474178 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
RAB3GAP2-204ENST00000474178 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
RAB3GAP2-204ENST00000474178 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
RAB3GAP2-204ENST00000474178 G3V3G9 751 aa13.06□□□□□ -0.32
RAB3GAP2-204ENST00000474178 IGF2BP3O00425 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
RAB3GAP2-204ENST00000474178 IRS4O14654 1257 aaPredicted RBP13.06□□□□□ -0.32
RAB3GAP2-204ENST00000474178 LDLRAD1Q5T700 205 aa13.06□□□□□ -0.32
RAB3GAP2-204ENST00000474178 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms