RNA–Protein interactions for RNA: ENST00000472478.6

BRD8-219, Transcript of bromodomain containing 8, humanhuman

TSL 3

Gene BRD8, Length 745 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-219ENST00000472478 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 GPR37L1O60883 481 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 PDE6BP35913 854 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
BRD8-219ENST00000472478 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
BRD8-219ENST00000472478 HOXA2O43364 376 aa13.19□□□□□ -0.3
BRD8-219ENST00000472478 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
BRD8-219ENST00000472478 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
BRD8-219ENST00000472478 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
BRD8-219ENST00000472478 NUDT7P0C024 238 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 FDX1P10109 184 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 CHRNA5P30532 468 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
BRD8-219ENST00000472478 TATDN2Q93075 761 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
BRD8-219ENST00000472478 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
BRD8-219ENST00000472478 E9PSI1 815 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 ATG7O95352 703 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 COL9A1P20849 921 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 RIPK4P57078 832 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 ST5P78524 1137 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
BRD8-219ENST00000472478 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 VIRMAQ69YN4 1812 aaKnown RBP13.17□□□□□ -0.3
BRD8-219ENST00000472478 KIF13BQ9NQT8 1826 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
BRD8-219ENST00000472478 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
BRD8-219ENST00000472478 GCGRP47871 477 aa13.16□□□□□ -0.3
BRD8-219ENST00000472478 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
BRD8-219ENST00000472478 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
BRD8-219ENST00000472478 PACS2Q86VP3 889 aa13.16□□□□□ -0.3
BRD8-219ENST00000472478 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
BRD8-219ENST00000472478 HMX1Q9NP08 348 aaPredicted RBP13.16□□□□□ -0.3
BRD8-219ENST00000472478 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
BRD8-219ENST00000472478 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
BRD8-219ENST00000472478 VAC14Q08AM6 782 aa13.15□□□□□ -0.3
BRD8-219ENST00000472478 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
BRD8-219ENST00000472478 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
BRD8-219ENST00000472478 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
BRD8-219ENST00000472478 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.3
BRD8-219ENST00000472478 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
BRD8-219ENST00000472478 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.33e-18■□□□□ 9.5
BRD8-219ENST00000472478 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 POTEMA6NI47 508 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
BRD8-219ENST00000472478 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
BRD8-219ENST00000472478 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 NBPF5PQ86XG9 351 aaPredicted RBP13.14□□□□□ -0.31
BRD8-219ENST00000472478 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 VRTNQ9H8Y1 702 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 ADCY9O60503 1353 aa13.14□□□□□ -0.31
BRD8-219ENST00000472478 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
BRD8-219ENST00000472478 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
BRD8-219ENST00000472478 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 GTF2E1P29083 439 aaPredicted RBP13.13□□□□□ -0.31
BRD8-219ENST00000472478 LMOD1P29536 600 aaPredicted RBP13.13□□□□□ -0.31
BRD8-219ENST00000472478 MTMR2Q13614 643 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
BRD8-219ENST00000472478 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
BRD8-219ENST00000472478 PTPREP23469 700 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
BRD8-219ENST00000472478 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
BRD8-219ENST00000472478 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 RNF181Q9P0P0 153 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
BRD8-219ENST00000472478 ERBB4Q15303 1308 aa13.12□□□□□ -0.31
BRD8-219ENST00000472478 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 LMNB1P20700 586 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 STYK1Q6J9G0 422 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
BRD8-219ENST00000472478 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
BRD8-219ENST00000472478 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
BRD8-219ENST00000472478 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
BRD8-219ENST00000472478 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
BRD8-219ENST00000472478 TOMM70O94826 608 aa13.1□□□□□ -0.31
BRD8-219ENST00000472478 ARSIQ5FYB1 569 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms