RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 PLEKHH1Q9ULM0 1364 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 FAM83GA6ND36 823 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 CTSOP43234 321 aaPredicted RBP6.98□□□□□ -1.29
RNF220-207ENST00000470498 DPYDQ12882 1025 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 ELOAQ14241 798 aaKnown RBP6.98□□□□□ -1.29
RNF220-207ENST00000470498 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.98□□□□□ -1.29
RNF220-207ENST00000470498 ZNF358Q9NW07 568 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 RGS12O14924 1447 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 YTHDC2Q9H6S0 1430 aaKnown RBP6.98□□□□□ -1.29
RNF220-207ENST00000470498 MYOM2P54296 1465 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 PXDNQ92626 1479 aa6.98□□□□□ -1.29
RNF220-207ENST00000470498 BACH1O14867 736 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 SEC13P55735 322 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 VPS72Q15906 364 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 FOXD4L5Q5VV16 416 aaPredicted RBP6.97□□□□□ -1.29
RNF220-207ENST00000470498 PRAM1Q96QH2 718 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 POGKQ9P215 609 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 ZMIZ1Q9ULJ6 1067 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
RNF220-207ENST00000470498 COL22A1Q8NFW1 1626 aaPredicted RBP6.97□□□□□ -1.29
RNF220-207ENST00000470498 SBNO1A3KN83 1393 aa6.96□□□□□ -1.29
RNF220-207ENST00000470498 PIK3C2GO75747 1445 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 TTLL8A6PVC2 850 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 M0R2N6 131 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 GPC1P35052 558 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 RNF144AP50876 292 aaPredicted RBP6.96□□□□□ -1.3
RNF220-207ENST00000470498 CENPCQ03188 943 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 TLR1Q15399 786 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 FAM200AQ8TCP9 573 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 SLC4A9Q96Q91 983 aa6.96□□□□□ -1.3
RNF220-207ENST00000470498 CDC42BPGQ6DT37 1551 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 SMTNP53814 917 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 PMFBP1Q8TBY8 1022 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 RNF217Q8TC41 542 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 DCAF11Q8TEB1 546 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 STK32AQ8WU08 396 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
RNF220-207ENST00000470498 SLIT2O94813 1529 aa6.95□□□□□ -1.3
RNF220-207ENST00000470498 NRXN1Q9ULB1 1477 aa6.94□□□□□ -1.3
RNF220-207ENST00000470498 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
RNF220-207ENST00000470498 SLC27A3Q5K4L6 730 aa6.94□□□□□ -1.3
RNF220-207ENST00000470498 TMEM151AQ8N4L1 468 aa6.94□□□□□ -1.3
RNF220-207ENST00000470498 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
RNF220-207ENST00000470498 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
RNF220-207ENST00000470498 TRAK1Q9UPV9 953 aa6.94□□□□□ -1.3
RNF220-207ENST00000470498 A6NJY4 79 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 FIGNL2A6NMB9 653 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 VSIG8P0DPA2 414 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 MTFR1Q15390 333 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 XP32Q5T750 250 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 TMEM164Q5U3C3 297 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 KRT27Q7Z3Y8 459 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 TNS4Q8IZW8 715 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 ARHGEF10O15013 1369 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 IFT172Q9UG01 1749 aa6.93□□□□□ -1.3
RNF220-207ENST00000470498 MARF1Q9Y4F3 1742 aaKnown RBP6.93□□□□□ -1.3
RNF220-207ENST00000470498 RGPD8O14715 1765 aaPredicted RBP6.92□□□□□ -1.3
RNF220-207ENST00000470498 MAN1A2O60476 641 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
RNF220-207ENST00000470498 EPHA4P54764 986 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 RASSF7Q02833 373 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 TMEM214Q6NUQ4 689 aaKnown RBP6.92□□□□□ -1.3
RNF220-207ENST00000470498 LYSMD3Q7Z3D4 306 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 HINFPQ9BQA5 517 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 SCHIP1Q9P0W5 487 aaPredicted RBP6.92□□□□□ -1.3
RNF220-207ENST00000470498 FMN2Q9NZ56 1722 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 GPRASP1Q5JY77 1395 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 RAB3GAP2Q9H2M9 1393 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 ANKARQ7Z5J8 1434 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 RALGAPBQ86X10 1494 aa6.92□□□□□ -1.3
RNF220-207ENST00000470498 KNDC1Q76NI1 1749 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 SOBPA7XYQ1 873 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 GDF11O95390 407 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 SF3B2Q13435 895 aaKnown RBP6.91□□□□□ -1.3
RNF220-207ENST00000470498 SWI5Q1ZZU3 235 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.91□□□□□ -1.3
RNF220-207ENST00000470498 PRICKLE2Q7Z3G6 844 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 DEFB132Q7Z7B7 95 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 NBPF15Q8N660 670 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 RETREG2Q8NC44 543 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 NGDNQ8NEJ9 315 aaKnown RBP6.91□□□□□ -1.3
RNF220-207ENST00000470498 NUDT16Q96DE0 195 aaKnown RBP6.91□□□□□ -1.3
RNF220-207ENST00000470498 HIRIP3Q9BW71 556 aaPredicted RBP6.91□□□□□ -1.3
RNF220-207ENST00000470498 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
RNF220-207ENST00000470498 PRR36Q9H6K5 1346 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 BLMP54132 1417 aaPredicted RBP6.91□□□□□ -1.3
RNF220-207ENST00000470498 TNS3Q68CZ2 1445 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 DLC1Q96QB1 1528 aa6.91□□□□□ -1.3
RNF220-207ENST00000470498 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.3
RNF220-207ENST00000470498 CDK2AP1O14519 115 aa6.9□□□□□ -1.3
RNF220-207ENST00000470498 FOXK2Q01167 660 aa6.9□□□□□ -1.3
RNF220-207ENST00000470498 NBPF8Q3BBV2 869 aa6.9□□□□□ -1.3
RNF220-207ENST00000470498 GNASQ5JWF2 1037 aa6.9□□□□□ -1.3
RNF220-207ENST00000470498 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms