RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
RNF220-207ENST00000470498 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
RNF220-207ENST00000470498 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
RNF220-207ENST00000470498 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
RNF220-207ENST00000470498 FOXD1Q16676 465 aa16.84■□□□□ 0.29
RNF220-207ENST00000470498 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
RNF220-207ENST00000470498 MSH5O43196 834 aa15.9■□□□□ 0.14
RNF220-207ENST00000470498 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
RNF220-207ENST00000470498 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
RNF220-207ENST00000470498 ADRA2BP18089 450 aa15.22■□□□□ 0.03
RNF220-207ENST00000470498 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
RNF220-207ENST00000470498 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
RNF220-207ENST00000470498 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
RNF220-207ENST00000470498 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
RNF220-207ENST00000470498 SCAF1Q9H7N4 1312 aaKnown RBP13.81□□□□□ -0.2
RNF220-207ENST00000470498 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
RNF220-207ENST00000470498 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
RNF220-207ENST00000470498 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
RNF220-207ENST00000470498 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
RNF220-207ENST00000470498 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
RNF220-207ENST00000470498 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
RNF220-207ENST00000470498 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
RNF220-207ENST00000470498 KCNA4P22459 653 aa13.07□□□□□ -0.32
RNF220-207ENST00000470498 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
RNF220-207ENST00000470498 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
RNF220-207ENST00000470498 POTEHQ6S545 545 aa12.85□□□□□ -0.35
RNF220-207ENST00000470498 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
RNF220-207ENST00000470498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNF220-207ENST00000470498 DSG3P32926 999 aa12.51□□□□□ -0.41
RNF220-207ENST00000470498 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
RNF220-207ENST00000470498 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
RNF220-207ENST00000470498 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
RNF220-207ENST00000470498 CAPN15O75808 1086 aa12.41□□□□□ -0.42
RNF220-207ENST00000470498 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
RNF220-207ENST00000470498 ABCB7O75027 752 aa12.12□□□□□ -0.47
RNF220-207ENST00000470498 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
RNF220-207ENST00000470498 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
RNF220-207ENST00000470498 ZBTB22O15209 634 aa12.02□□□□□ -0.49
RNF220-207ENST00000470498 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
RNF220-207ENST00000470498 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
RNF220-207ENST00000470498 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
RNF220-207ENST00000470498 APLP2Q06481 763 aa11.91□□□□□ -0.5
RNF220-207ENST00000470498 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
RNF220-207ENST00000470498 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
RNF220-207ENST00000470498 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
RNF220-207ENST00000470498 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
RNF220-207ENST00000470498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.78□□□□□ -0.52
RNF220-207ENST00000470498 HNRNPUL2Q1KMD3 747 aaKnown RBP11.78□□□□□ -0.52
RNF220-207ENST00000470498 SP7Q8TDD2 431 aaPredicted RBP11.77□□□□□ -0.53
RNF220-207ENST00000470498 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
RNF220-207ENST00000470498 POLA2Q14181 598 aa11.62□□□□□ -0.55
RNF220-207ENST00000470498 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
RNF220-207ENST00000470498 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
RNF220-207ENST00000470498 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
RNF220-207ENST00000470498 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
RNF220-207ENST00000470498 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
RNF220-207ENST00000470498 HAX1O00165 279 aa11.42□□□□□ -0.58
RNF220-207ENST00000470498 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
RNF220-207ENST00000470498 FXR2P51116 673 aaKnown RBP eCLIP11.34□□□□□ -0.59
RNF220-207ENST00000470498 EVX2Q03828 476 aa11.32□□□□□ -0.6
RNF220-207ENST00000470498 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
RNF220-207ENST00000470498 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
RNF220-207ENST00000470498 PRKAR2AP13861 404 aaKnown RBP11.02□□□□□ -0.65
RNF220-207ENST00000470498 LHX8Q68G74 356 aa11.02□□□□□ -0.65
RNF220-207ENST00000470498 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
RNF220-207ENST00000470498 GABBR2O75899 941 aa10.98□□□□□ -0.65
RNF220-207ENST00000470498 FBLN2P98095 1184 aa10.98□□□□□ -0.65
RNF220-207ENST00000470498 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
RNF220-207ENST00000470498 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
RNF220-207ENST00000470498 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
RNF220-207ENST00000470498 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
RNF220-207ENST00000470498 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
RNF220-207ENST00000470498 FKBP8Q14318 412 aa10.89□□□□□ -0.67
RNF220-207ENST00000470498 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
RNF220-207ENST00000470498 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
RNF220-207ENST00000470498 CHADLQ6NUI6 762 aa10.8□□□□□ -0.68
RNF220-207ENST00000470498 PLSCR2Q9NRY7 297 aa10.8□□□□□ -0.68
RNF220-207ENST00000470498 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
RNF220-207ENST00000470498 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
RNF220-207ENST00000470498 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
RNF220-207ENST00000470498 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
RNF220-207ENST00000470498 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
RNF220-207ENST00000470498 PROM2Q8N271 834 aa10.61□□□□□ -0.71
RNF220-207ENST00000470498 ABCC9O60706 1549 aa10.61□□□□□ -0.71
RNF220-207ENST00000470498 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
RNF220-207ENST00000470498 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
RNF220-207ENST00000470498 CCDC180Q9P1Z9 1646 aa10.52□□□□□ -0.73
RNF220-207ENST00000470498 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
RNF220-207ENST00000470498 CLCN6P51797 869 aa10.5□□□□□ -0.73
RNF220-207ENST00000470498 OTUD5Q96G74 571 aa10.48□□□□□ -0.73
RNF220-207ENST00000470498 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
RNF220-207ENST00000470498 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
RNF220-207ENST00000470498 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
RNF220-207ENST00000470498 POTEMA6NI47 508 aa10.42□□□□□ -0.74
RNF220-207ENST00000470498 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
RNF220-207ENST00000470498 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
RNF220-207ENST00000470498 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
RNF220-207ENST00000470498 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
RNF220-207ENST00000470498 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
RNF220-207ENST00000470498 CREBZFQ9NS37 354 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms