RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 G3V3G9 751 aa13.61□□□□□ -0.23
HDAC3-203ENST00000467533 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
HDAC3-203ENST00000467533 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
HDAC3-203ENST00000467533 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
HDAC3-203ENST00000467533 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 ALDH1A1P00352 501 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
HDAC3-203ENST00000467533 NF2P35240 595 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 TMEM106CQ9BVX2 250 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 POLLQ9UGP5 575 aa13.6□□□□□ -0.23
HDAC3-203ENST00000467533 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
HDAC3-203ENST00000467533 LAMB1P07942 1786 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 H0YGN5 161 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
HDAC3-203ENST00000467533 GPSM2P81274 684 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 ARMC5Q96C12 935 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 ERO1AQ96HE7 468 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 MYOZ2Q9NPC6 264 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 TRMT112Q9UI30 125 aaKnown RBP13.59□□□□□ -0.23
HDAC3-203ENST00000467533 PTPN22Q9Y2R2 807 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 COL4A1P02462 1669 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 SH3TC1Q8TE82 1336 aa13.59□□□□□ -0.23
HDAC3-203ENST00000467533 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
HDAC3-203ENST00000467533 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
HDAC3-203ENST00000467533 CD99L2Q8TCZ2 262 aa13.58□□□□□ -0.24
HDAC3-203ENST00000467533 PNISRQ8TF01 805 aaKnown RBP13.58□□□□□ -0.24
HDAC3-203ENST00000467533 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
HDAC3-203ENST00000467533 THUMPD2Q9BTF0 503 aaKnown RBP13.58□□□□□ -0.24
HDAC3-203ENST00000467533 ZC3H12CQ9C0D7 883 aaKnown RBP13.58□□□□□ -0.24
HDAC3-203ENST00000467533 EIF4A1P60842 406 aaKnown RBP13.57□□□□□ -0.24
HDAC3-203ENST00000467533 PRKG1Q13976 671 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 NLRP10Q86W26 655 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 AGBL3Q8NEM8 1001 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
HDAC3-203ENST00000467533 CFAP53Q96M91 514 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 SZT2Q5T011 3432 aa13.57□□□□□ -0.24
HDAC3-203ENST00000467533 CENPFP49454 3210 aa13.56□□□□□ -0.24
HDAC3-203ENST00000467533 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
HDAC3-203ENST00000467533 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC3-203ENST00000467533 PTPN12Q05209 780 aaKnown RBP13.56□□□□□ -0.24
HDAC3-203ENST00000467533 SPRYD7Q5W111 196 aa13.56□□□□□ -0.24
HDAC3-203ENST00000467533 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
HDAC3-203ENST00000467533 TBC1D16Q8TBP0 767 aa13.56□□□□□ -0.24
HDAC3-203ENST00000467533 EFCC1Q9HA90 598 aa13.56□□□□□ -0.24
HDAC3-203ENST00000467533 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
HDAC3-203ENST00000467533 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
HDAC3-203ENST00000467533 MANSC4A6NHS7 340 aaPredicted RBP13.55□□□□□ -0.24
HDAC3-203ENST00000467533 USP17L8P0C7I0 530 aa13.55□□□□□ -0.24
HDAC3-203ENST00000467533 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
HDAC3-203ENST00000467533 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
HDAC3-203ENST00000467533 CEP290O15078 2479 aa13.55□□□□□ -0.24
HDAC3-203ENST00000467533 UFL1O94874 794 aa13.54□□□□□ -0.24
HDAC3-203ENST00000467533 SLC4A8Q2Y0W8 1093 aa13.54□□□□□ -0.24
HDAC3-203ENST00000467533 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
HDAC3-203ENST00000467533 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
HDAC3-203ENST00000467533 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
HDAC3-203ENST00000467533 BRCA2P51587 3418 aa13.54□□□□□ -0.24
HDAC3-203ENST00000467533 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
HDAC3-203ENST00000467533 ANXA1P04083 346 aa13.53□□□□□ -0.24
HDAC3-203ENST00000467533 INHBEP58166 350 aa13.53□□□□□ -0.24
HDAC3-203ENST00000467533 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
HDAC3-203ENST00000467533 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
HDAC3-203ENST00000467533 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
HDAC3-203ENST00000467533 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
HDAC3-203ENST00000467533 IGF2BP3O00425 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC3-203ENST00000467533 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
HDAC3-203ENST00000467533 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.25
HDAC3-203ENST00000467533 PROSER3Q2NL68 480 aa13.52□□□□□ -0.25
HDAC3-203ENST00000467533 ZNF646O15015 1829 aaPredicted RBP13.52□□□□□ -0.25
HDAC3-203ENST00000467533 MYCP01106 439 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-203ENST00000467533 CRHR2Q13324 411 aa13.51□□□□□ -0.25
HDAC3-203ENST00000467533 PDIA6Q15084 440 aa13.51□□□□□ -0.25
HDAC3-203ENST00000467533 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
HDAC3-203ENST00000467533 GMLQ99445 158 aa13.51□□□□□ -0.25
HDAC3-203ENST00000467533 ANKIB1Q9P2G1 1089 aa13.51□□□□□ -0.25
HDAC3-203ENST00000467533 GGA1Q9UJY5 639 aa13.51□□□□□ -0.25
HDAC3-203ENST00000467533 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 USP17L3A6NCW0 530 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 USP17L4A6NCW7 530 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-203ENST00000467533 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-203ENST00000467533 SP3Q02447 781 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 SF3B3Q15393 1217 aaKnown RBP13.5□□□□□ -0.25
HDAC3-203ENST00000467533 LDLRAD1Q5T700 205 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 OTUD7BQ6GQQ9 843 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 COPS6Q7L5N1 327 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 USP17L1Q7RTZ2 530 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 DPF3Q92784 378 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 SLC10A4Q96EP9 437 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 PODXL2Q9NZ53 605 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 FZD1Q9UP38 647 aa13.5□□□□□ -0.25
HDAC3-203ENST00000467533 WNT10BO00744 389 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 SASH1O94885 1247 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 NEFMP07197 916 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms