RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
HLA-C-205ENST00000466892 SNED1Q8TER0 1413 aa20.25■□□□□ 0.83
HLA-C-205ENST00000466892 XDHP47989 1333 aa20.25■□□□□ 0.83
HLA-C-205ENST00000466892 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
HLA-C-205ENST00000466892 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.83
HLA-C-205ENST00000466892 ERC1Q8IUD2 1116 aa20.24■□□□□ 0.83
HLA-C-205ENST00000466892 SUPT20HQ8NEM7 779 aa20.24■□□□□ 0.83
HLA-C-205ENST00000466892 PSMD1Q99460 953 aa20.24■□□□□ 0.83
HLA-C-205ENST00000466892 RTFDC1Q9BY42 306 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-205ENST00000466892 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
HLA-C-205ENST00000466892 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-205ENST00000466892 LTBP3Q9NS15 1303 aa20.24■□□□□ 0.83
HLA-C-205ENST00000466892 SURF6O75683 361 aaKnown RBP20.23■□□□□ 0.83
HLA-C-205ENST00000466892 CHRNDQ07001 517 aa20.23■□□□□ 0.83
HLA-C-205ENST00000466892 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
HLA-C-205ENST00000466892 MPNDQ8N594 471 aa20.23■□□□□ 0.83
HLA-C-205ENST00000466892 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
HLA-C-205ENST00000466892 COL4A1P02462 1669 aa20.22■□□□□ 0.83
HLA-C-205ENST00000466892 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
HLA-C-205ENST00000466892 RAB11FIP3O75154 756 aa20.22■□□□□ 0.83
HLA-C-205ENST00000466892 DPP8Q6V1X1 898 aaPredicted RBP20.22■□□□□ 0.83
HLA-C-205ENST00000466892 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
HLA-C-205ENST00000466892 PA2G4Q9UQ80 394 aaKnown RBP20.22■□□□□ 0.83
HLA-C-205ENST00000466892 LEMD3Q9Y2U8 911 aa20.22■□□□□ 0.83
HLA-C-205ENST00000466892 PDE8BO95263 885 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 ATP2B4P23634 1241 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 GPR162Q16538 588 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 LRRC24Q50LG9 513 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 METTL24Q5JXM2 366 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 PUS3Q9BZE2 481 aaKnown RBP20.21■□□□□ 0.83
HLA-C-205ENST00000466892 SIL1Q9H173 461 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 CEP126Q9P2H0 1117 aa20.21■□□□□ 0.83
HLA-C-205ENST00000466892 NSFL1CQ9UNZ2 370 aaKnown RBP20.21■□□□□ 0.83
HLA-C-205ENST00000466892 SLX4Q8IY92 1834 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
HLA-C-205ENST00000466892 GPSM2P81274 684 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 FKBP4Q02790 459 aaKnown RBP eCLIP20.2■□□□□ 0.82
HLA-C-205ENST00000466892 VGLL2Q8N8G2 317 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 GCC1Q96CN9 775 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 TAOK3Q9H2K8 898 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 GGA1Q9UJY5 639 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 ARFGEF1Q9Y6D6 1849 aa20.2■□□□□ 0.82
HLA-C-205ENST00000466892 OS9Q13438 667 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-205ENST00000466892 UBE4AQ14139 1066 aa20.19■□□□□ 0.82
HLA-C-205ENST00000466892 EYA3Q99504 573 aa20.19■□□□□ 0.82
HLA-C-205ENST00000466892 GPR108Q9NPR9 543 aa20.19■□□□□ 0.82
HLA-C-205ENST00000466892 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
HLA-C-205ENST00000466892 C15orf52Q6ZUT6 534 aaKnown RBP20.18■□□□□ 0.82
HLA-C-205ENST00000466892 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
HLA-C-205ENST00000466892 TBC1D16Q8TBP0 767 aa20.18■□□□□ 0.82
HLA-C-205ENST00000466892 KIF1BPQ96EK5 621 aa20.18■□□□□ 0.82
HLA-C-205ENST00000466892 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
HLA-C-205ENST00000466892 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-205ENST00000466892 EXOC6BQ9Y2D4 811 aa20.17■□□□□ 0.82
HLA-C-205ENST00000466892 ZNF804BA4D1E1 1349 aa20.17■□□□□ 0.82
HLA-C-205ENST00000466892 UFL1O94874 794 aa20.16■□□□□ 0.82
HLA-C-205ENST00000466892 KCNJ4P48050 445 aa20.16■□□□□ 0.82
HLA-C-205ENST00000466892 OLFM4Q6UX06 510 aa20.16■□□□□ 0.82
HLA-C-205ENST00000466892 LPIN2Q92539 896 aa20.16■□□□□ 0.82
HLA-C-205ENST00000466892 MED23Q9ULK4 1368 aa20.16■□□□□ 0.82
HLA-C-205ENST00000466892 LTBP1Q14766 1721 aa20.16■□□□□ 0.82
HLA-C-205ENST00000466892 NFKBIEO00221 500 aa20.15■□□□□ 0.82
HLA-C-205ENST00000466892 SASH1O94885 1247 aa20.15■□□□□ 0.82
HLA-C-205ENST00000466892 ARHGAP27Q6ZUM4 889 aa20.15■□□□□ 0.82
HLA-C-205ENST00000466892 POLLQ9UGP5 575 aa20.15■□□□□ 0.82
HLA-C-205ENST00000466892 DUOX1Q9NRD9 1551 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 C6orf229H3BNL8 230 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 TAF5LO75529 589 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 IFIT1P09914 478 aaKnown RBP20.14■□□□□ 0.81
HLA-C-205ENST00000466892 FGFR2P21802 821 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 KIAA2012Q0VF49 1180 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 TFCP2Q12800 502 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 RHPN1Q8TCX5 695 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 LRRCC1Q9C099 1032 aa20.14■□□□□ 0.81
HLA-C-205ENST00000466892 SLC5A1P13866 664 aa20.13■□□□□ 0.81
HLA-C-205ENST00000466892 LMNB1P20700 586 aa20.13■□□□□ 0.81
HLA-C-205ENST00000466892 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
HLA-C-205ENST00000466892 WASHC4Q2M389 1173 aa20.13■□□□□ 0.81
HLA-C-205ENST00000466892 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
HLA-C-205ENST00000466892 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
HLA-C-205ENST00000466892 TAF1P21675 1872 aa20.12■□□□□ 0.81
HLA-C-205ENST00000466892 ZBTB22O15209 634 aa20.12■□□□□ 0.81
HLA-C-205ENST00000466892 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
HLA-C-205ENST00000466892 CLASRPQ8N2M8 674 aaKnown RBP20.12■□□□□ 0.81
HLA-C-205ENST00000466892 TNNI3KQ59H18 835 aa20.11■□□□□ 0.81
HLA-C-205ENST00000466892 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
HLA-C-205ENST00000466892 FPGT-TNNI3KV9GXZ4 949 aa20.11■□□□□ 0.81
HLA-C-205ENST00000466892 ZNF609O15014 1411 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
HLA-C-205ENST00000466892 IRS2Q9Y4H2 1338 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 FER1L6Q2WGJ9 1857 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 PPIP5K2O43314 1243 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 IGHDP01880 384 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
HLA-C-205ENST00000466892 ZBTB47Q9UFB7 747 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-205ENST00000466892 CACNA1SQ13698 1873 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms