RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CEP63Q96MT8 703 aa3.38□□□□□ -1.87
NUCKS1-202ENST00000464938 GSX2Q9BZM3 304 aa3.38□□□□□ -1.87
NUCKS1-202ENST00000464938 EFCC1Q9HA90 598 aa3.38□□□□□ -1.87
NUCKS1-202ENST00000464938 BRD7Q9NPI1 651 aa3.38□□□□□ -1.87
NUCKS1-202ENST00000464938 STRN4Q9NRL3 753 aa3.38□□□□□ -1.87
NUCKS1-202ENST00000464938 KCNH4Q9UQ05 1017 aa3.38□□□□□ -1.87
NUCKS1-202ENST00000464938 NEURL1BA8MQ27 555 aa3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 PLCB3Q01970 1234 aa3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 COL9A3Q14050 684 aaPredicted RBP3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 LRP8Q14114 963 aa3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 PRSS36Q5K4E3 855 aa3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 PDE12Q6L8Q7 609 aaKnown RBP3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 FOXD4L4Q8WXT5 416 aaPredicted RBP3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 USP20Q9Y2K6 914 aa3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 GJA3Q9Y6H8 435 aa3.37□□□□□ -1.87
NUCKS1-202ENST00000464938 XYLBO75191 536 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 MAP3K6O95382 1288 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 P4HBP07237 508 aaKnown RBP3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 HOXD8P13378 290 aaPredicted RBP3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 EPB42P16452 691 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 PCSK2P16519 638 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 ZNF16P17020 682 aaPredicted RBP3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 AAMPQ13685 434 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 ENOX2Q16206 610 aaKnown RBP3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 SLC30A3Q99726 388 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 PLVAPQ9BX97 442 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 NIF3L1Q9GZT8 377 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 DNAJC25Q9H1X3 360 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 CHRDQ9H2X0 955 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 ELP3Q9H9T3 547 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 ZFYVE28Q9HCC9 887 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 AVENQ9NQS1 362 aaPredicted RBP3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 MARK1Q9P0L2 795 aa3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 FNDC3AQ9Y2H6 1198 aaKnown RBP3.36□□□□□ -1.87
NUCKS1-202ENST00000464938 A6NHS1 94 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 UNCXA6NJT0 531 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 UBAP1LF5GYI3 381 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 KHNYNO15037 678 aaKnown RBP3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 HYAL3O43820 417 aaPredicted RBP3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 TNFRSF21O75509 655 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 TAGLNQ01995 201 aaKnown RBP3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 CCINQ13939 588 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 NLRP13Q86W25 1043 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 CMTR1Q8N1G2 835 aaKnown RBP3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 CSRNP1Q96S65 589 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 TMEM63CQ9P1W3 806 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 CNTN3Q9P232 1028 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 ZFATQ9P243 1243 aa3.35□□□□□ -1.87
NUCKS1-202ENST00000464938 DCDC2BA2VCK2 349 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 EIF1AYO14602 144 aaKnown RBP3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 SASH3O75995 380 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 NEFLP07196 543 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 VAMP1P23763 118 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 TARSP26639 723 aaKnown RBP3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 ADH6P28332 368 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 SPEM2Q0P670 501 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 ORC1Q13415 861 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 C8orf34Q49A92 452 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 EAPPQ56P03 285 aaPredicted RBP3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 NBPF11Q86T75 865 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 OR13H1Q8NG92 308 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 ZNF428Q96B54 188 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 BCL2L13Q9BXK5 485 aa3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 TLR7Q9NYK1 1049 aaKnown RBP3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 KIAA1522Q9P206 1035 aaPredicted RBP3.34□□□□□ -1.87
NUCKS1-202ENST00000464938 MMP20O60882 483 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 CPNE3O75131 537 aaKnown RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 PRPF40AO75400 957 aaKnown RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 H2AFB1P0C5Y9 115 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 H2AFB2P0C5Z0 115 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 CD33P20138 364 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 SOX18P35713 384 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 FGD1P98174 961 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 ZNF468Q5VIY5 522 aaPredicted RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 USPL1Q5W0Q7 1092 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 MCTP1Q6DN14 999 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 ALG1LQ6GMV1 187 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 ZNF438Q7Z4V0 828 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 GALNT12Q8IXK2 581 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 C1orf127Q8N9H9 656 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 TRPM4Q8TD43 1214 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 TMC1Q8TDI8 760 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 SNX29Q8TEQ0 813 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 FBF1Q8TES7 1133 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 GIPC2Q8TF65 315 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 PMEPA1Q969W9 287 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 SETDB2Q96T68 719 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 IGSF5Q9NSI5 407 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 ABI2Q9NYB9 513 aaPredicted RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 SALL4Q9UJQ4 1053 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 FOXD3Q9UJU5 478 aaPredicted RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 WWC3Q9ULE0 1092 aa3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.33□□□□□ -1.88
NUCKS1-202ENST00000464938 ADARB2-AS1A8MUL3 147 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 ZBTB42B2RXF5 422 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 EREGO14944 169 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 SIN3BO75182 1162 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms