RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 SKAP1Q86WV1 359 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 ZNF34Q8IZ26 560 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 ZBTB38Q8NAP3 1195 aaPredicted RBP10.14□□□□□ -0.79
RPA3-205ENST00000462723 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 JARID2Q92833 1246 aaPredicted RBP10.14□□□□□ -0.79
RPA3-205ENST00000462723 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 LRRC4BQ9NT99 713 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 SCN7AQ01118 1682 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 RGPD3A6NKT7 1758 aaPredicted RBP10.14□□□□□ -0.79
RPA3-205ENST00000462723 RGPD4Q7Z3J3 1758 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
RPA3-205ENST00000462723 ZPR1O75312 459 aa10.13□□□□□ -0.79
RPA3-205ENST00000462723 SURF6O75683 361 aaKnown RBP10.13□□□□□ -0.79
RPA3-205ENST00000462723 RABL6Q3YEC7 729 aaPredicted RBP10.13□□□□□ -0.79
RPA3-205ENST00000462723 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
RPA3-205ENST00000462723 LNPKQ9C0E8 428 aa10.13□□□□□ -0.79
RPA3-205ENST00000462723 NARFQ9UHQ1 456 aa10.13□□□□□ -0.79
RPA3-205ENST00000462723 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
RPA3-205ENST00000462723 EXOC6BQ9Y2D4 811 aa10.13□□□□□ -0.79
RPA3-205ENST00000462723 CDHR2Q9BYE9 1310 aa10.12□□□□□ -0.79
RPA3-205ENST00000462723 APBB1O00213 710 aa10.12□□□□□ -0.79
RPA3-205ENST00000462723 HSP90B1P14625 803 aaKnown RBP10.12□□□□□ -0.79
RPA3-205ENST00000462723 RFC4P35249 363 aa10.12□□□□□ -0.79
RPA3-205ENST00000462723 OS9Q13438 667 aaPredicted RBP10.12□□□□□ -0.79
RPA3-205ENST00000462723 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
RPA3-205ENST00000462723 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
RPA3-205ENST00000462723 LRRCC1Q9C099 1032 aa10.12□□□□□ -0.79
RPA3-205ENST00000462723 NIP7Q9Y221 180 aaKnown RBP eCLIP10.12□□□□□ -0.79
RPA3-205ENST00000462723 UBR3Q6ZT12 1888 aa10.12□□□□□ -0.79
RPA3-205ENST00000462723 C4AP0C0L4 1744 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 PDE4AP27815 886 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 FOXO4P98177 505 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 LMBR1LQ6UX01 489 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
RPA3-205ENST00000462723 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 UTP14AQ9BVJ6 771 aaKnown RBP10.11□□□□□ -0.79
RPA3-205ENST00000462723 PLA2G12BQ9BX93 195 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 NOP58Q9Y2X3 529 aaKnown RBP10.11□□□□□ -0.79
RPA3-205ENST00000462723 EP400Q96L91 3159 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 MYH3P11055 1940 aa10.11□□□□□ -0.79
RPA3-205ENST00000462723 UBN2Q6ZU65 1347 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
RPA3-205ENST00000462723 IRS4O14654 1257 aaPredicted RBP10.1□□□□□ -0.79
RPA3-205ENST00000462723 PHF14O94880 888 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 SSFA2P28290 1259 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
RPA3-205ENST00000462723 PPP4R3BQ5MIZ7 849 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 SUSD4Q5VX71 490 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 KIF1BPQ96EK5 621 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 CHMP3Q9Y3E7 222 aa10.1□□□□□ -0.79
RPA3-205ENST00000462723 USP42Q9H9J4 1324 aaKnown RBP10.09□□□□□ -0.79
RPA3-205ENST00000462723 SMARCA5O60264 1052 aaPredicted RBP10.09□□□□□ -0.79
RPA3-205ENST00000462723 SF3B2Q13435 895 aaKnown RBP10.09□□□□□ -0.79
RPA3-205ENST00000462723 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
RPA3-205ENST00000462723 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
RPA3-205ENST00000462723 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
RPA3-205ENST00000462723 BCL11AQ9H165 835 aa10.09□□□□□ -0.79
RPA3-205ENST00000462723 COPRSQ9NQ92 184 aa10.09□□□□□ -0.79
RPA3-205ENST00000462723 SRP68Q9UHB9 627 aaKnown RBP10.09□□□□□ -0.79
RPA3-205ENST00000462723 LAMB2P55268 1798 aa10.09□□□□□ -0.79
RPA3-205ENST00000462723 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 PDE8AO60658 829 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 NTSR2O95665 410 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 RFX5P48382 616 aaPredicted RBP10.08□□□□□ -0.8
RPA3-205ENST00000462723 CTSWP56202 376 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 CCDC57Q2TAC2 916 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 TBC1D9BQ66K14 1250 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 SMIM5Q71RC9 77 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 AMIGO3Q86WK7 504 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 FLAD1Q8NFF5 587 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 NYXQ9GZU5 481 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 TFCP2L1Q9NZI6 479 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 PA2G4Q9UQ80 394 aaKnown RBP10.08□□□□□ -0.8
RPA3-205ENST00000462723 VPS9D1Q9Y2B5 631 aa10.08□□□□□ -0.8
RPA3-205ENST00000462723 COL24A1Q17RW2 1714 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 CSF1RP07333 972 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 GTF2E1P29083 439 aaPredicted RBP10.07□□□□□ -0.8
RPA3-205ENST00000462723 PTPN12Q05209 780 aaKnown RBP10.07□□□□□ -0.8
RPA3-205ENST00000462723 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
RPA3-205ENST00000462723 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 BICDL1Q6ZP65 573 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 PLEKHM2Q8IWE5 1019 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 SYNE4Q8N205 404 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 CLASRPQ8N2M8 674 aaKnown RBP10.07□□□□□ -0.8
RPA3-205ENST00000462723 KCNK17Q96T54 332 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 SIL1Q9H173 461 aa10.07□□□□□ -0.8
RPA3-205ENST00000462723 PPP1R37O75864 691 aa10.06□□□□□ -0.8
RPA3-205ENST00000462723 BAG6P46379 1132 aa10.06□□□□□ -0.8
RPA3-205ENST00000462723 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
RPA3-205ENST00000462723 Q6ZNB5 142 aa10.06□□□□□ -0.8
RPA3-205ENST00000462723 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
RPA3-205ENST00000462723 C16orf71Q8IYS4 520 aaPredicted RBP10.06□□□□□ -0.8
RPA3-205ENST00000462723 TTLL11Q8NHH1 800 aa10.06□□□□□ -0.8
RPA3-205ENST00000462723 KLHDC4Q8TBB5 520 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms