RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 BAG6P46379 1132 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 ANAPC15P60006 121 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 RPS8P62241 208 aaKnown RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 TRDNQ13061 729 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 KRT32Q14532 448 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 PRPF40BQ6NWY9 871 aaKnown RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 PTF1AQ7RTS3 328 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 KBTBD3Q8NAB2 608 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 JAKMIP1Q96N16 626 aaKnown RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 TBC1D2Q9BYX2 928 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 UPF3BQ9BZI7 483 aaKnown RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 ANKRD2Q9GZV1 360 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 CHMP5Q9NZZ3 219 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 RAI14Q9P0K7 980 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 ABCF2Q9UG63 623 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 CTNNA3Q9UI47 895 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 CYP46A1Q9Y6A2 500 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 PARP3Q9Y6F1 533 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 U3KPZ7 1027 aaPredicted RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 UBN2Q6ZU65 1347 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 PDE8BO95263 885 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 CSF1RP07333 972 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 SSFA2P28290 1259 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 CHAF1AQ13111 956 aaPredicted RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 TBC1D9BQ66K14 1250 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 SMIM5Q71RC9 77 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 RALYLQ86SE5 291 aaKnown RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 NLGN1Q8N2Q7 840 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 HAUS7Q99871 368 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 SEC31BQ9NQW1 1179 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 TOMM22Q9NS69 142 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 USP42Q9H9J4 1324 aaKnown RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 NWD2Q9ULI1 1742 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 RGL2O15211 777 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 ONECUT3O60422 494 aaPredicted RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 TAF5LO75529 589 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 NTSR2O95665 410 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 MCMDC2Q4G0Z9 681 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 BLOC1S2Q6QNY1 142 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 AIDAQ96BJ3 306 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 EDC3Q96F86 508 aaKnown RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 GBP4Q96PP9 640 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 ANP32EQ9BTT0 268 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 CARMIL3Q8ND23 1372 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 RNF113AO15541 343 aaKnown RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 EPB41L2O43491 1005 aaKnown RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 ADORA1P30542 326 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 ATG9AQ7Z3C6 839 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 FBXW7Q969H0 707 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 NACAP1Q9BZK3 213 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 RBM8AQ9Y5S9 174 aaKnown RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 NDUFB9Q9Y6M9 179 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 CCDC171Q6TFL3 1326 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 ADAMTS7Q9UKP4 1686 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 C6orf229H3BNL8 230 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 SERPINB2P05120 415 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 NFIXQ14938 502 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 FBXO41Q8TF61 875 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 CHMP4CQ96CF2 233 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 RBM17Q96I25 401 aaKnown RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 FAM227BQ96M60 508 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 HMG20BQ9P0W2 317 aa4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 IQSEC3Q9UPP2 1182 aaPredicted RBP4.92□□□□□ -1.62
ATP13A3-206ENST00000461660 CASTP20810 708 aaKnown RBP4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 ZAP70P43403 619 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 CHRNDQ07001 517 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 SLC9C2Q5TAH2 1124 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 IL27Q8NEV9 243 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 SNX21Q969T3 373 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 SALL3Q9BXA9 1300 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 ANKRD1Q15327 319 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 IMMTQ16891 758 aaKnown RBP4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 CCDC102BQ68D86 513 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 PPP4R3CPQ6ZMV5 832 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 AMOTL1Q8IY63 956 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 ZNF622Q969S3 477 aaKnown RBP eCLIP4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 HELLSQ9NRZ9 838 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 PDRG1Q9NUG6 133 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 NSFL1CQ9UNZ2 370 aaKnown RBP4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 KIF3AQ9Y496 699 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 RIPOR2Q9Y4F9 1068 aa4.91□□□□□ -1.62
ATP13A3-206ENST00000461660 A0A0D9SFI3 127 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 NCLP19338 710 aaKnown RBP4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 PHKA1P46020 1223 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 TDO2P48775 406 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 NUCB2P80303 420 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 UBE4AQ14139 1066 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 SF3B3Q15393 1217 aaKnown RBP4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 DZIP1Q86YF9 867 aaKnown RBP4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 APPBP2Q92624 585 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 MSL1Q68DK7 614 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 KLHL34Q8N239 644 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 SPATA5Q8NB90 893 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 CIZ1Q9ULV3 898 aaPredicted RBP4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 SMC3Q9UQE7 1217 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 C5P01031 1676 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 DOT1LQ8TEK3 1739 aa4.9□□□□□ -1.62
ATP13A3-206ENST00000461660 UFL1O94874 794 aa4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 HIBADHP31937 336 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms