RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 ASTN2O75129 1339 aaPredicted RBP21.32■■□□□ 1
SHF-202ENST00000458022 RASAL3Q86YV0 1011 aa21.32■■□□□ 1
SHF-202ENST00000458022 ZNF428Q96B54 188 aa21.32■■□□□ 1
SHF-202ENST00000458022 FAM89AQ96GI7 184 aa21.32■■□□□ 1
SHF-202ENST00000458022 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
SHF-202ENST00000458022 FKBP1BP68106 108 aa21.31■■□□□ 1
SHF-202ENST00000458022 PLBD2Q8NHP8 589 aa21.31■■□□□ 1
SHF-202ENST00000458022 ZNF609O15014 1411 aa21.3■■□□□ 1
SHF-202ENST00000458022 ZNF280AP59817 542 aaPredicted RBP21.3■■□□□ 1
SHF-202ENST00000458022 ZC3H12CQ9C0D7 883 aaKnown RBP21.3■■□□□ 1
SHF-202ENST00000458022 PODXL2Q9NZ53 605 aa21.3■■□□□ 1
SHF-202ENST00000458022 CHPF2Q9P2E5 772 aa21.3■■□□□ 1
SHF-202ENST00000458022 HPS5Q9UPZ3 1129 aa21.3■■□□□ 1
SHF-202ENST00000458022 TAF1P21675 1872 aa21.29■■□□□ 1
SHF-202ENST00000458022 COL4A1P02462 1669 aa21.29■■□□□ 1
SHF-202ENST00000458022 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
SHF-202ENST00000458022 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
SHF-202ENST00000458022 PKN2Q16513 984 aaKnown RBP21.29■■□□□ 1
SHF-202ENST00000458022 ANKRD13DQ6ZTN6 518 aa21.29■■□□□ 1
SHF-202ENST00000458022 KRT24Q2M2I5 525 aa21.28■■□□□ 1
SHF-202ENST00000458022 ANGEL2Q5VTE6 544 aaKnown RBP21.28■■□□□ 1
SHF-202ENST00000458022 AGBL3Q8NEM8 1001 aa21.28■■□□□ 1
SHF-202ENST00000458022 DDX60Q8IY21 1712 aaKnown RBP21.28■■□□□ 1
SHF-202ENST00000458022 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
SHF-202ENST00000458022 TMPOP42166 694 aaKnown RBP21.27■■□□□ 1
SHF-202ENST00000458022 SCARF1Q14162 830 aa21.27■■□□□ 1
SHF-202ENST00000458022 CHL1O00533 1208 aa21.26■□□□□ 0.99
SHF-202ENST00000458022 IRS4O14654 1257 aaPredicted RBP21.26■□□□□ 0.99
SHF-202ENST00000458022 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
SHF-202ENST00000458022 RSBN1LQ6PCB5 846 aaPredicted RBP21.26■□□□□ 0.99
SHF-202ENST00000458022 PITPNM2Q9BZ72 1349 aa21.26■□□□□ 0.99
SHF-202ENST00000458022 UFL1O94874 794 aa21.25■□□□□ 0.99
SHF-202ENST00000458022 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
SHF-202ENST00000458022 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
SHF-202ENST00000458022 G3V3G9 751 aa21.24■□□□□ 0.99
SHF-202ENST00000458022 HOXB7P09629 217 aa21.24■□□□□ 0.99
SHF-202ENST00000458022 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
SHF-202ENST00000458022 ZNF296Q8WUU4 475 aaPredicted RBP21.24■□□□□ 0.99
SHF-202ENST00000458022 GMLQ99445 158 aa21.24■□□□□ 0.99
SHF-202ENST00000458022 DBF4Q9UBU7 674 aaPredicted RBP21.24■□□□□ 0.99
SHF-202ENST00000458022 GGA1Q9UJY5 639 aa21.24■□□□□ 0.99
SHF-202ENST00000458022 HDAC9Q9UKV0 1011 aa21.24■□□□□ 0.99
SHF-202ENST00000458022 PAPPA2Q9BXP8 1791 aa21.23■□□□□ 0.99
SHF-202ENST00000458022 NOM1Q5C9Z4 860 aaKnown RBP21.23■□□□□ 0.99
SHF-202ENST00000458022 MYOZ2Q9NPC6 264 aa21.23■□□□□ 0.99
SHF-202ENST00000458022 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
SHF-202ENST00000458022 AKAP11Q9UKA4 1901 aa21.22■□□□□ 0.99
SHF-202ENST00000458022 TBC1D8O95759 1140 aa21.22■□□□□ 0.99
SHF-202ENST00000458022 USP17L8P0C7I0 530 aa21.22■□□□□ 0.99
SHF-202ENST00000458022 SEC31BQ9NQW1 1179 aa21.22■□□□□ 0.99
SHF-202ENST00000458022 POLR2AP24928 1970 aaKnown RBP21.22■□□□□ 0.99
SHF-202ENST00000458022 SCN9AQ15858 1988 aa21.21■□□□□ 0.99
SHF-202ENST00000458022 MOB2Q70IA6 237 aa21.21■□□□□ 0.99
SHF-202ENST00000458022 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
SHF-202ENST00000458022 HYPKQ9NX55 129 aa21.21■□□□□ 0.99
SHF-202ENST00000458022 HSP90B1P14625 803 aaKnown RBP21.2■□□□□ 0.98
SHF-202ENST00000458022 TM4SF4P48230 202 aa21.2■□□□□ 0.98
SHF-202ENST00000458022 UBE2Q2LH0YL09 131 aa21.19■□□□□ 0.98
SHF-202ENST00000458022 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
SHF-202ENST00000458022 GPR25O00155 361 aa21.18■□□□□ 0.98
SHF-202ENST00000458022 CCDC152Q4G0S7 254 aa21.18■□□□□ 0.98
SHF-202ENST00000458022 FBXO46Q6PJ61 603 aaPredicted RBP21.18■□□□□ 0.98
SHF-202ENST00000458022 XDHP47989 1333 aa21.18■□□□□ 0.98
SHF-202ENST00000458022 USP17L3A6NCW0 530 aa21.17■□□□□ 0.98
SHF-202ENST00000458022 USP17L4A6NCW7 530 aa21.17■□□□□ 0.98
SHF-202ENST00000458022 USP17L1Q7RTZ2 530 aa21.17■□□□□ 0.98
SHF-202ENST00000458022 CFHR5Q9BXR6 569 aa21.17■□□□□ 0.98
SHF-202ENST00000458022 SCAF8Q9UPN6 1271 aaKnown RBP21.17■□□□□ 0.98
SHF-202ENST00000458022 TRIM35Q9UPQ4 493 aa21.17■□□□□ 0.98
SHF-202ENST00000458022 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
SHF-202ENST00000458022 ATP2B4P23634 1241 aa21.15■□□□□ 0.98
SHF-202ENST00000458022 NEUROD2Q15784 382 aa21.15■□□□□ 0.98
SHF-202ENST00000458022 NBPF9Q3BBW0 867 aa21.15■□□□□ 0.98
SHF-202ENST00000458022 PRAMEF18Q5VWM3 479 aa21.15■□□□□ 0.98
SHF-202ENST00000458022 RIC3Q7Z5B4 369 aa21.15■□□□□ 0.98
SHF-202ENST00000458022 PDE8AO60658 829 aa21.14■□□□□ 0.97
SHF-202ENST00000458022 GOLGA2Q08379 1002 aa21.14■□□□□ 0.97
SHF-202ENST00000458022 SREBF2Q12772 1141 aa21.14■□□□□ 0.97
SHF-202ENST00000458022 TTLL12Q14166 644 aaPredicted RBP21.14■□□□□ 0.97
SHF-202ENST00000458022 DUSP27Q5VZP5 1158 aa21.14■□□□□ 0.97
SHF-202ENST00000458022 CCDC191Q8NCU4 936 aa21.14■□□□□ 0.97
SHF-202ENST00000458022 GCC1Q96CN9 775 aa21.14■□□□□ 0.97
SHF-202ENST00000458022 FKTNO75072 461 aa21.13■□□□□ 0.97
SHF-202ENST00000458022 PCCAP05165 728 aaPredicted RBP21.13■□□□□ 0.97
SHF-202ENST00000458022 ANKRD18AQ8IVF6 992 aa21.13■□□□□ 0.97
SHF-202ENST00000458022 WNT10BO00744 389 aa21.12■□□□□ 0.97
SHF-202ENST00000458022 NF2P35240 595 aa21.12■□□□□ 0.97
SHF-202ENST00000458022 DACT2Q5SW24 774 aa21.12■□□□□ 0.97
SHF-202ENST00000458022 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
SHF-202ENST00000458022 MED23Q9ULK4 1368 aa21.11■□□□□ 0.97
SHF-202ENST00000458022 OGFOD1Q8N543 542 aa21.11■□□□□ 0.97
SHF-202ENST00000458022 CCDC85AQ96PX6 553 aaPredicted RBP21.11■□□□□ 0.97
SHF-202ENST00000458022 MYD88Q99836 296 aa21.11■□□□□ 0.97
SHF-202ENST00000458022 PSME4Q14997 1843 aa21.11■□□□□ 0.97
SHF-202ENST00000458022 MYO3BQ8WXR4 1341 aa21.1■□□□□ 0.97
SHF-202ENST00000458022 PTPN12Q05209 780 aaKnown RBP21.1■□□□□ 0.97
SHF-202ENST00000458022 MKRN3Q13064 507 aaKnown RBP21.1■□□□□ 0.97
SHF-202ENST00000458022 RALBP1Q15311 655 aa21.1■□□□□ 0.97
SHF-202ENST00000458022 RUNDC1Q96C34 613 aa21.1■□□□□ 0.97
SHF-202ENST00000458022 R3HDMLQ9H3Y0 253 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms