RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CCDC150Q8NCX0 1101 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 RGS22Q8NE09 1264 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 KCNG4Q8TDN1 519 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 XAGE3Q8WTP9 111 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 MRPS27Q92552 414 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 LRRC59Q96AG4 307 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 MRFAP1L1Q96HT8 127 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 HAUS7Q99871 368 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 DSCC1Q9BVC3 393 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 GTPBP4Q9BZE4 634 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 DNAJC25Q9H1X3 360 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 SLC52A2Q9HAB3 445 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 BCL2L12Q9HB09 334 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 GPR108Q9NPR9 543 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 PXDNQ92626 1479 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 LAMB4A4D0S4 1761 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 SCN11AQ9UI33 1791 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 SETD1BQ9UPS6 1966 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PTPDC1A2A3K4 754 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 RIOK3O14730 519 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CPLX1O14810 134 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CTIFO43310 598 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CBFA2T2O43439 604 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 MYO1BO43795 1136 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CDKL5O76039 1030 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZFYP08048 801 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 MYL6BP14649 208 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 IL15P40933 162 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ME1P48163 572 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ST3GAL1Q11201 340 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 TFCP2Q12800 502 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 GNL2Q13823 731 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PTPN14Q15678 1187 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 IMMTQ16891 758 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PROSER3Q2NL68 480 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PPP4R3BQ5MIZ7 849 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 GORABQ5T7V8 394 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CEP135Q66GS9 1140 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZSCAN25Q6NSZ9 544 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CPLX2Q6PUV4 134 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 SYNE3Q6ZMZ3 975 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 COPS6Q7L5N1 327 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 BRAPQ7Z569 592 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 C17orf53Q8N3J3 647 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 JMYQ8N9B5 988 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 FSIP1Q8NA03 581 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 KBTBD3Q8NAB2 608 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PLBD2Q8NHP8 589 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 SMARCC2Q8TAQ2 1214 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 DDX54Q8TDD1 881 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 DDX11Q96FC9 970 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF274Q96GC6 653 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC34Q96HJ3 373 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 DCAF5Q96JK2 942 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 C16orf45Q96MC5 204 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 NEUROD6Q96NK8 337 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ARID3AQ99856 593 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 SDF4Q9BRK5 362 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 KCNF1Q9H3M0 494 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PAG1Q9NWQ8 432 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 NLRP2Q9NX02 1062 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 TLR7Q9NYK1 1049 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 IMPACTQ9P2X3 320 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 TFIP11Q9UBB9 837 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 HOOK1Q9UJC3 728 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 PYCARDQ9ULZ3 195 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 AKAP2Q9Y2D5 859 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ABCC12Q96J65 1359 aa3.89□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF609O15014 1411 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 C5P01031 1676 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TRPM3Q9HCF6 1732 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 A0A087WZG4 1122 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 A0A1W2PQ27 194 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 A0A1W2PQ64 194 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 A0A1W2PQD8 194 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 GOLIM4O00461 696 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 RNF113AO15541 343 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 JAK2O60674 1132 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 NR1I2O75469 434 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 CIAO1O76071 339 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 KIF20AO95235 890 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 SMC2O95347 1197 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 YEATS4O95619 227 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 IGKV5-2P06315 115 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 IFIT1P09914 478 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 PHKG2P15735 406 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 SFPQP23246 707 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 CABP4P57796 275 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 PTPN12Q05209 780 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 GABPB1Q06547 395 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 DMTNQ08495 405 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 SCRN1Q12765 414 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TRDNQ13061 729 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TRIM29Q14134 588 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 RABL6Q3YEC7 729 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TAF7LQ5H9L4 462 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms