RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
CPSF6-203ENST00000456847 SCNN1DP51172 638 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 HTRA3P83110 453 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 TNIP1Q15025 636 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 FAM161AQ3B820 660 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 DCAF8Q5TAQ9 597 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 SRCIN1Q9C0H9 1055 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 ZC3H12CQ9C0D7 883 aaKnown RBP20.56■□□□□ 0.88
CPSF6-203ENST00000456847 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
CPSF6-203ENST00000456847 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
CPSF6-203ENST00000456847 ALDH1L1O75891 902 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 ITGA6P23229 1130 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 SSH1Q8WYL5 1049 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 YDJCA8MPS7 323 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 GRM8O00222 908 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 ECE2O60344 883 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 EPS15P42566 896 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 DOK7Q18PE1 504 aa20.55■□□□□ 0.88
CPSF6-203ENST00000456847 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
CPSF6-203ENST00000456847 PTPRCP08575 1304 aa20.54■□□□□ 0.88
CPSF6-203ENST00000456847 GMPSP49915 693 aaPredicted RBP20.54■□□□□ 0.88
CPSF6-203ENST00000456847 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
CPSF6-203ENST00000456847 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
CPSF6-203ENST00000456847 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
CPSF6-203ENST00000456847 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
CPSF6-203ENST00000456847 ANKRD18BA2A2Z9 1011 aa20.53■□□□□ 0.88
CPSF6-203ENST00000456847 CSF1RP07333 972 aa20.53■□□□□ 0.88
CPSF6-203ENST00000456847 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
CPSF6-203ENST00000456847 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
CPSF6-203ENST00000456847 MINPP1Q9UNW1 487 aa20.52■□□□□ 0.88
CPSF6-203ENST00000456847 ADARB2Q9NS39 739 aaKnown RBP20.51■□□□□ 0.87
CPSF6-203ENST00000456847 FOXO4P98177 505 aa20.51■□□□□ 0.87
CPSF6-203ENST00000456847 USP50Q70EL3 339 aaPredicted RBP20.51■□□□□ 0.87
CPSF6-203ENST00000456847 SCN9AQ15858 1988 aa20.5■□□□□ 0.87
CPSF6-203ENST00000456847 PSMD14O00487 310 aa20.5■□□□□ 0.87
CPSF6-203ENST00000456847 CT47B1P0C2W7 299 aaPredicted RBP20.5■□□□□ 0.87
CPSF6-203ENST00000456847 IFIT5Q13325 482 aaKnown RBP20.5■□□□□ 0.87
CPSF6-203ENST00000456847 MAP1SQ66K74 1059 aaPredicted RBP20.5■□□□□ 0.87
CPSF6-203ENST00000456847 A0A1B0GUL6 1792 aa20.5■□□□□ 0.87
CPSF6-203ENST00000456847 PSME4Q14997 1843 aa20.49■□□□□ 0.87
CPSF6-203ENST00000456847 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
CPSF6-203ENST00000456847 CCT4P50991 539 aaKnown RBP20.49■□□□□ 0.87
CPSF6-203ENST00000456847 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
CPSF6-203ENST00000456847 ZBTB12Q9Y330 459 aaPredicted RBP20.49■□□□□ 0.87
CPSF6-203ENST00000456847 CNTROBQ8N137 903 aa20.48■□□□□ 0.87
CPSF6-203ENST00000456847 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
CPSF6-203ENST00000456847 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
CPSF6-203ENST00000456847 MED23Q9ULK4 1368 aa20.48■□□□□ 0.87
CPSF6-203ENST00000456847 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
CPSF6-203ENST00000456847 CCDC57Q2TAC2 916 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 EPHA10Q5JZY3 1008 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 KLRG1Q96E93 195 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 CNOT7Q9UIV1 285 aaKnown RBP20.47■□□□□ 0.87
CPSF6-203ENST00000456847 PASKQ96RG2 1323 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 H7C1D1 291 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 KCNJ4P48050 445 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 MICALL2Q8IY33 904 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 SUCLG2Q96I99 432 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 KCNQ5Q9NR82 932 aa20.47■□□□□ 0.87
CPSF6-203ENST00000456847 LEMD3Q9Y2U8 911 aa20.46■□□□□ 0.87
CPSF6-203ENST00000456847 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
CPSF6-203ENST00000456847 NBPF7P0C2Y1 421 aaPredicted RBP20.45■□□□□ 0.86
CPSF6-203ENST00000456847 CHRNDQ07001 517 aa20.45■□□□□ 0.86
CPSF6-203ENST00000456847 CREBZFQ9NS37 354 aa20.45■□□□□ 0.86
CPSF6-203ENST00000456847 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
CPSF6-203ENST00000456847 RPS12P25398 132 aaKnown RBP20.45■□□□□ 0.86
CPSF6-203ENST00000456847 ZNF804BA4D1E1 1349 aa20.45■□□□□ 0.86
CPSF6-203ENST00000456847 WTIPA6NIX2 430 aaPredicted RBP20.44■□□□□ 0.86
CPSF6-203ENST00000456847 TRPM4Q8TD43 1214 aa20.44■□□□□ 0.86
CPSF6-203ENST00000456847 DPF2Q92785 391 aa20.44■□□□□ 0.86
CPSF6-203ENST00000456847 TRPM7Q96QT4 1865 aa20.43■□□□□ 0.86
CPSF6-203ENST00000456847 UTYO14607 1347 aa20.43■□□□□ 0.86
CPSF6-203ENST00000456847 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
CPSF6-203ENST00000456847 CNNM1Q9NRU3 951 aa20.43■□□□□ 0.86
CPSF6-203ENST00000456847 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
CPSF6-203ENST00000456847 CEP350Q5VT06 3117 aa20.43■□□□□ 0.86
CPSF6-203ENST00000456847 FBXW7Q969H0 707 aa20.43■□□□□ 0.86
CPSF6-203ENST00000456847 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
CPSF6-203ENST00000456847 VIL1P09327 827 aaKnown RBP20.42■□□□□ 0.86
CPSF6-203ENST00000456847 PODNQ7Z5L7 613 aa20.42■□□□□ 0.86
CPSF6-203ENST00000456847 LDHAL6AQ6ZMR3 332 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 HELBQ8NG08 1087 aaPredicted RBP20.41■□□□□ 0.86
CPSF6-203ENST00000456847 API5Q9BZZ5 524 aaKnown RBP20.41■□□□□ 0.86
CPSF6-203ENST00000456847 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
CPSF6-203ENST00000456847 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 TAF5LO75529 589 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 RARSP54136 660 aaKnown RBP20.41■□□□□ 0.86
CPSF6-203ENST00000456847 TBC1D10BQ4KMP7 808 aaPredicted RBP20.41■□□□□ 0.86
CPSF6-203ENST00000456847 RSBN1LQ6PCB5 846 aaPredicted RBP20.41■□□□□ 0.86
CPSF6-203ENST00000456847 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 SAMD7Q7Z3H4 446 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 COA1Q9GZY4 146 aa20.41■□□□□ 0.86
CPSF6-203ENST00000456847 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
CPSF6-203ENST00000456847 PLIN1O60240 522 aa20.4■□□□□ 0.86
CPSF6-203ENST00000456847 RBM26Q5T8P6 1007 aaKnown RBP20.4■□□□□ 0.86
CPSF6-203ENST00000456847 MKRN1Q9UHC7 482 aaKnown RBP20.4■□□□□ 0.86
CPSF6-203ENST00000456847 KLRK1P26718 216 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms