RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NEUROD6Q96NK8 337 aa21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 TCIRG1Q13488 830 aa21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 LARP1BQ659C4 914 aaKnown RBP21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 ZNF594Q96JF6 807 aaPredicted RBP21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 HELLSQ9NRZ9 838 aa21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 PAG1Q9NWQ8 432 aa21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 TMOD3Q9NYL9 352 aa21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 VPS37CA5D8V6 355 aaPredicted RBP21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 FIBPO43427 364 aa21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 CYP21A2P08686 494 aa21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 CSPP1Q1MSJ5 1256 aa21.86■■□□□ 1.09
SEMA3B-209ENST00000456560 PDCP20941 246 aa21.85■■□□□ 1.09
SEMA3B-209ENST00000456560 GOLIM4O00461 696 aa21.84■■□□□ 1.09
SEMA3B-209ENST00000456560 CCDC9Q9Y3X0 531 aaKnown RBP21.84■■□□□ 1.09
SEMA3B-209ENST00000456560 LETM1O95202 739 aaPredicted RBP21.84■■□□□ 1.09
SEMA3B-209ENST00000456560 ZMYM1Q5SVZ6 1142 aa21.84■■□□□ 1.09
SEMA3B-209ENST00000456560 VSIG10Q8N0Z9 540 aa21.84■■□□□ 1.09
SEMA3B-209ENST00000456560 PUS3Q9BZE2 481 aaKnown RBP21.84■■□□□ 1.09
SEMA3B-209ENST00000456560 KLHL34Q8N239 644 aa21.83■■□□□ 1.09
SEMA3B-209ENST00000456560 RNF214Q8ND24 703 aa21.83■■□□□ 1.09
SEMA3B-209ENST00000456560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.83■■□□□ 1.09
SEMA3B-209ENST00000456560 TEX13AQ9BXU3 409 aaPredicted RBP21.83■■□□□ 1.09
SEMA3B-209ENST00000456560 BTG4Q9NY30 223 aa21.83■■□□□ 1.09
SEMA3B-209ENST00000456560 A0A1B0GUL7 405 aa21.83■■□□□ 1.08
SEMA3B-209ENST00000456560 CDC37L1Q7L3B6 337 aa21.83■■□□□ 1.08
SEMA3B-209ENST00000456560 SPEF2Q9C093 1822 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 DNAJC10Q8IXB1 793 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 PIGBQ92521 554 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 DSCC1Q9BVC3 393 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 OFD1O75665 1012 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 GTF3C6Q969F1 213 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 PLA2G12BQ9BX93 195 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 FBXO3Q9UK99 471 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 ASAP1Q9ULH1 1129 aa21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 COL22A1Q8NFW1 1626 aaPredicted RBP21.82■■□□□ 1.08
SEMA3B-209ENST00000456560 IFIT1P09914 478 aaKnown RBP21.81■■□□□ 1.08
SEMA3B-209ENST00000456560 Q6ZUG5 572 aa21.81■■□□□ 1.08
SEMA3B-209ENST00000456560 STOX1Q6ZVD7 989 aa21.81■■□□□ 1.08
SEMA3B-209ENST00000456560 PCCAP05165 728 aaPredicted RBP21.8■■□□□ 1.08
SEMA3B-209ENST00000456560 STK3Q13188 491 aa21.8■■□□□ 1.08
SEMA3B-209ENST00000456560 SLFNL1Q499Z3 407 aa21.8■■□□□ 1.08
SEMA3B-209ENST00000456560 CEP126Q9P2H0 1117 aa21.8■■□□□ 1.08
SEMA3B-209ENST00000456560 FAM184AQ8NB25 1140 aa21.8■■□□□ 1.08
SEMA3B-209ENST00000456560 RNF113AO15541 343 aaKnown RBP21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 CSF1RP07333 972 aa21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 HSPA1LP34931 641 aa21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 CCDC57Q2TAC2 916 aa21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 UVSSAQ2YD98 709 aa21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 NOL7Q9UMY1 257 aaKnown RBP21.79■■□□□ 1.08
SEMA3B-209ENST00000456560 LAMA4Q16363 1823 aa21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 HMGB1P09429 215 aaKnown RBP21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 KRT85P78386 507 aa21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 KIF6Q6ZMV9 814 aa21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 TTC6Q86TZ1 520 aa21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 ELP1O95163 1332 aa21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 FERMT3Q86UX7 667 aa21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.78■■□□□ 1.08
SEMA3B-209ENST00000456560 ITGB4P16144 1822 aa21.77■■□□□ 1.08
SEMA3B-209ENST00000456560 MAST3O60307 1309 aa21.77■■□□□ 1.08
SEMA3B-209ENST00000456560 DHX32Q7L7V1 743 aaKnown RBP21.77■■□□□ 1.08
SEMA3B-209ENST00000456560 ZBTB38Q8NAP3 1195 aaPredicted RBP21.77■■□□□ 1.08
SEMA3B-209ENST00000456560 FUCA2Q9BTY2 467 aa21.77■■□□□ 1.08
SEMA3B-209ENST00000456560 STARD3NLO95772 234 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 HSPD1P10809 573 aaKnown RBP21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 EXOSC10Q01780 885 aaKnown RBP21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 FAM89AQ96GI7 184 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 AKAP2Q9Y2D5 859 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 ZNF330Q9Y3S2 320 aaPredicted RBP21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 DISP2A7MBM2 1401 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 MAP3K15Q6ZN16 1313 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 JAK2O60674 1132 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 TPRNQ4KMQ1 711 aa21.76■■□□□ 1.07
SEMA3B-209ENST00000456560 PFKFB2O60825 505 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 FAM173BQ6P4H8 233 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 GIGYF2Q6Y7W6 1299 aaKnown RBP21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 BRF1Q92994 677 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 AGXT2Q9BYV1 514 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 CDHR2Q9BYE9 1310 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 ADORA1P30542 326 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 SMARCC2Q8TAQ2 1214 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 XAGE2Q96GT9 111 aa21.75■■□□□ 1.07
SEMA3B-209ENST00000456560 CCDC158Q5M9N0 1113 aa21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 LLPHQ9BRT6 129 aaKnown RBP21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 CCDC39Q9UFE4 941 aa21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 M0R2C6 588 aa21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 SCRN1Q12765 414 aa21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 LRRC2Q9BYS8 371 aa21.74■■□□□ 1.07
SEMA3B-209ENST00000456560 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-209ENST00000456560 A0A0G2JLW4 131 aa21.73■■□□□ 1.07
SEMA3B-209ENST00000456560 E7EWF7 191 aa21.73■■□□□ 1.07
SEMA3B-209ENST00000456560 BCL9O00512 1426 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 IFIT5Q13325 482 aaKnown RBP21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 HLFQ16534 295 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 TTC39AQ5SRH9 613 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 OSBP2Q969R2 916 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 SCAND2PQ9GZW5 306 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms