RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 CSF1RP07333 972 aa22.28■■□□□ 1.16
HOXD8-203ENST00000450510 YBX3P16989 372 aaKnown RBP eCLIP22.28■■□□□ 1.16
HOXD8-203ENST00000450510 OS9Q13438 667 aaPredicted RBP22.28■■□□□ 1.16
HOXD8-203ENST00000450510 TBC1D9Q6ZT07 1266 aa22.28■■□□□ 1.16
HOXD8-203ENST00000450510 DDX46Q7L014 1031 aaKnown RBP22.28■■□□□ 1.16
HOXD8-203ENST00000450510 JARID2Q92833 1246 aaPredicted RBP22.28■■□□□ 1.16
HOXD8-203ENST00000450510 ARFGEF1Q9Y6D6 1849 aa22.28■■□□□ 1.16
HOXD8-203ENST00000450510 RTL9Q8NET4 1388 aa22.27■■□□□ 1.16
HOXD8-203ENST00000450510 BBOX1O75936 387 aa22.27■■□□□ 1.16
HOXD8-203ENST00000450510 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
HOXD8-203ENST00000450510 CTSWP56202 376 aa22.27■■□□□ 1.16
HOXD8-203ENST00000450510 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.16
HOXD8-203ENST00000450510 TTLL11Q8NHH1 800 aa22.27■■□□□ 1.16
HOXD8-203ENST00000450510 C22orf23Q9BZE7 217 aa22.27■■□□□ 1.16
HOXD8-203ENST00000450510 SDSP20132 328 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 G3BP1Q13283 466 aaKnown RBP eCLIP22.26■■□□□ 1.15
HOXD8-203ENST00000450510 SOGA3Q5TF21 947 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 TMC4Q7Z404 712 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 CLASRPQ8N2M8 674 aaKnown RBP22.26■■□□□ 1.15
HOXD8-203ENST00000450510 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 COPRSQ9NQ92 184 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 TTC41PQ6P2S7 1318 aa22.26■■□□□ 1.15
HOXD8-203ENST00000450510 RBM25P49756 843 aaKnown RBP22.25■■□□□ 1.15
HOXD8-203ENST00000450510 FOXO4P98177 505 aa22.25■■□□□ 1.15
HOXD8-203ENST00000450510 GRAPQ13588 217 aa22.25■■□□□ 1.15
HOXD8-203ENST00000450510 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
HOXD8-203ENST00000450510 CC2D2BQ6DHV5 1058 aa22.25■■□□□ 1.15
HOXD8-203ENST00000450510 GRAPLQ8TC17 118 aaPredicted RBP22.25■■□□□ 1.15
HOXD8-203ENST00000450510 MYH3P11055 1940 aa22.25■■□□□ 1.15
HOXD8-203ENST00000450510 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
HOXD8-203ENST00000450510 WWC3Q9ULE0 1092 aa22.24■■□□□ 1.15
HOXD8-203ENST00000450510 SLX4Q8IY92 1834 aa22.23■■□□□ 1.15
HOXD8-203ENST00000450510 BECN1Q14457 450 aa22.23■■□□□ 1.15
HOXD8-203ENST00000450510 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
HOXD8-203ENST00000450510 DAXXQ9UER7 740 aaPredicted RBP22.23■■□□□ 1.15
HOXD8-203ENST00000450510 GOLGB1Q14789 3259 aaKnown RBP22.23■■□□□ 1.15
HOXD8-203ENST00000450510 EPHA10Q5JZY3 1008 aa22.22■■□□□ 1.15
HOXD8-203ENST00000450510 ERC2O15083 957 aa22.21■■□□□ 1.15
HOXD8-203ENST00000450510 RFX5P48382 616 aaPredicted RBP22.21■■□□□ 1.15
HOXD8-203ENST00000450510 RPS8P62241 208 aaKnown RBP22.21■■□□□ 1.15
HOXD8-203ENST00000450510 CDC5LQ99459 802 aaKnown RBP22.21■■□□□ 1.15
HOXD8-203ENST00000450510 ATP6V0A2Q9Y487 856 aa22.21■■□□□ 1.15
HOXD8-203ENST00000450510 PPEF1O14829 653 aaPredicted RBP22.2■■□□□ 1.14
HOXD8-203ENST00000450510 C21orf2O43822 256 aa22.2■■□□□ 1.14
HOXD8-203ENST00000450510 SP8Q8IXZ3 490 aa22.2■■□□□ 1.14
HOXD8-203ENST00000450510 GREM2Q9H772 168 aa22.2■■□□□ 1.14
HOXD8-203ENST00000450510 PA2G4Q9UQ80 394 aaKnown RBP22.2■■□□□ 1.14
HOXD8-203ENST00000450510 GLRX3O76003 335 aaKnown RBP22.19■■□□□ 1.14
HOXD8-203ENST00000450510 LMBR1LQ6UX01 489 aa22.19■■□□□ 1.14
HOXD8-203ENST00000450510 RTKN2Q8IZC4 609 aa22.19■■□□□ 1.14
HOXD8-203ENST00000450510 CELF1Q92879 486 aaKnown RBP22.19■■□□□ 1.14
HOXD8-203ENST00000450510 TMX4Q9H1E5 349 aaPredicted RBP22.19■■□□□ 1.14
HOXD8-203ENST00000450510 IFIT2P09913 472 aaKnown RBP22.18■■□□□ 1.14
HOXD8-203ENST00000450510 CCDC93Q567U6 631 aa22.18■■□□□ 1.14
HOXD8-203ENST00000450510 SEC31BQ9NQW1 1179 aa22.18■■□□□ 1.14
HOXD8-203ENST00000450510 FBXO3Q9UK99 471 aa22.18■■□□□ 1.14
HOXD8-203ENST00000450510 LTBP3Q9NS15 1303 aa22.17■■□□□ 1.14
HOXD8-203ENST00000450510 SASH1O94885 1247 aa22.17■■□□□ 1.14
HOXD8-203ENST00000450510 REC8O95072 547 aa22.17■■□□□ 1.14
HOXD8-203ENST00000450510 ITGA6P23229 1130 aa22.17■■□□□ 1.14
HOXD8-203ENST00000450510 PTPN12Q05209 780 aaKnown RBP22.17■■□□□ 1.14
HOXD8-203ENST00000450510 ANKRD18AQ8IVF6 992 aa22.17■■□□□ 1.14
HOXD8-203ENST00000450510 PI4K2BQ8TCG2 481 aa22.17■■□□□ 1.14
HOXD8-203ENST00000450510 CACNA1SQ13698 1873 aa22.16■■□□□ 1.14
HOXD8-203ENST00000450510 ANKRD18BA2A2Z9 1011 aa22.16■■□□□ 1.14
HOXD8-203ENST00000450510 EPB41L2O43491 1005 aaKnown RBP22.16■■□□□ 1.14
HOXD8-203ENST00000450510 IFIT5Q13325 482 aaKnown RBP22.16■■□□□ 1.14
HOXD8-203ENST00000450510 ARHGAP27Q6ZUM4 889 aa22.16■■□□□ 1.14
HOXD8-203ENST00000450510 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
HOXD8-203ENST00000450510 ECHDC1Q9NTX5 307 aa22.16■■□□□ 1.14
HOXD8-203ENST00000450510 BSDC1Q9NW68 430 aaPredicted RBP22.16■■□□□ 1.14
HOXD8-203ENST00000450510 SNED1Q8TER0 1413 aa22.15■■□□□ 1.14
HOXD8-203ENST00000450510 UTRNP46939 3433 aa22.15■■□□□ 1.14
HOXD8-203ENST00000450510 CCDC57Q2TAC2 916 aa22.15■■□□□ 1.14
HOXD8-203ENST00000450510 CNTROBQ8N137 903 aa22.15■■□□□ 1.14
HOXD8-203ENST00000450510 CCDC85AQ96PX6 553 aaPredicted RBP22.15■■□□□ 1.14
HOXD8-203ENST00000450510 FER1L6Q2WGJ9 1857 aa22.14■■□□□ 1.13
HOXD8-203ENST00000450510 CIAO1O76071 339 aa22.14■■□□□ 1.13
HOXD8-203ENST00000450510 AACSQ86V21 672 aa22.14■■□□□ 1.13
HOXD8-203ENST00000450510 PSMD1Q99460 953 aa22.14■■□□□ 1.13
HOXD8-203ENST00000450510 GPR108Q9NPR9 543 aa22.14■■□□□ 1.13
HOXD8-203ENST00000450510 AK9Q5TCS8 1911 aa22.14■■□□□ 1.13
HOXD8-203ENST00000450510 TAF1P21675 1872 aa22.13■■□□□ 1.13
HOXD8-203ENST00000450510 TRIM6-TRIM34B2RNG4 842 aa22.13■■□□□ 1.13
HOXD8-203ENST00000450510 IGHMBP2P38935 993 aaKnown RBP22.13■■□□□ 1.13
HOXD8-203ENST00000450510 LRRC37AA6NMS7 1700 aa22.12■■□□□ 1.13
HOXD8-203ENST00000450510 NFKBIEO00221 500 aa22.12■■□□□ 1.13
HOXD8-203ENST00000450510 IL15P40933 162 aaPredicted RBP22.12■■□□□ 1.13
HOXD8-203ENST00000450510 FKBP4Q02790 459 aaKnown RBP eCLIP22.12■■□□□ 1.13
HOXD8-203ENST00000450510 RTFDC1Q9BY42 306 aaPredicted RBP22.12■■□□□ 1.13
HOXD8-203ENST00000450510 VPS33BQ9H267 617 aa22.12■■□□□ 1.13
HOXD8-203ENST00000450510 TAOK3Q9H2K8 898 aa22.12■■□□□ 1.13
HOXD8-203ENST00000450510 ZNF219Q9P2Y4 722 aaPredicted RBP22.12■■□□□ 1.13
HOXD8-203ENST00000450510 CHMP3Q9Y3E7 222 aa22.12■■□□□ 1.13
HOXD8-203ENST00000450510 TSHZ3Q63HK5 1081 aa22.11■■□□□ 1.13
HOXD8-203ENST00000450510 MPHOSPH8Q99549 860 aa22.11■■□□□ 1.13
HOXD8-203ENST00000450510 SIL1Q9H173 461 aa22.11■■□□□ 1.13
HOXD8-203ENST00000450510 PODXL2Q9NZ53 605 aa22.11■■□□□ 1.13
HOXD8-203ENST00000450510 CHMLP26374 656 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms