RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 SYKP43405 635 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 ANKRD2Q9GZV1 360 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 FSD2A1L4K1 749 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 SSX2IPQ9Y2D8 614 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 LMAN1P49257 510 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 GRIPAP1Q4V328 841 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 BCCIPQ9P287 314 aaKnown RBP eCLIP20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 N4BP3O15049 544 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 HOMER2Q9NSB8 354 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 EHBP1Q8NDI1 1231 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 TNPO1Q92973 898 aaKnown RBP20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 UBE2HP62256 183 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 RIMS2Q9UQ26 1411 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 RRAGBQ5VZM2 374 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 SPAG5Q96R06 1193 aa20.25■□□□□ 0.83
SKIDA1-202ENST00000449193 PLS1Q14651 629 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 UBE4AQ14139 1066 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 KCNG4Q8TDN1 519 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 C19orf44Q9H6X5 657 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 SPDYE3A6NKU9 549 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 DDX12PQ92771 950 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 IMPG2Q9BZV3 1241 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 MAP3K1Q13233 1512 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 RTL9Q8NET4 1388 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 USP25Q9UHP3 1055 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 ZNF165P49910 485 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 MEIS3Q99687 375 aa20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
SKIDA1-202ENST00000449193 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 AKR1B10O60218 316 aa20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 DHX37Q8IY37 1157 aaKnown RBP20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 LRRC59Q96AG4 307 aaKnown RBP20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 LMOD1P29536 600 aaPredicted RBP20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 RRP36Q96EU6 259 aaKnown RBP20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 GDPD2Q9HCC8 539 aa20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 PPFIA3O75145 1194 aa20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 ATP8B2P98198 1209 aa20.23■□□□□ 0.83
SKIDA1-202ENST00000449193 TRMT1Q9NXH9 659 aaKnown RBP20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 CALML3P27482 149 aa20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 TNNI2P48788 182 aa20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 RBM26Q5T8P6 1007 aaKnown RBP20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 ISM2Q6H9L7 571 aa20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 TCHPQ9BT92 498 aa20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
SKIDA1-202ENST00000449193 TTC12Q9H892 705 aaPredicted RBP20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 IKBKGQ9Y6K9 419 aa20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 SPAG1Q07617 926 aa20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 FLT4P35916 1363 aa20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 NUCB1Q02818 461 aa20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 KIAA0753Q2KHM9 967 aa20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
SKIDA1-202ENST00000449193 FERP16591 822 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 EIF4A2Q14240 407 aaKnown RBP20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 ZNF354CQ86Y25 554 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 AFMP43652 599 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 PSMD1Q99460 953 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 JADE2Q9NQC1 790 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 FBLN1P23142 703 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 BBXQ8WY36 941 aaPredicted RBP20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 RBM17Q96I25 401 aaKnown RBP20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 MCM9Q9NXL9 1143 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 NFATC2IPQ8NCF5 419 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 LDHBP07195 334 aaKnown RBP20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 ZSCAN22P10073 491 aaPredicted RBP20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
SKIDA1-202ENST00000449193 PSMA7O14818 248 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 SDSP20132 328 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 ANKRD44Q8N8A2 993 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 PLCH2O75038 1416 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 A2MP01023 1474 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 KIF4AO95239 1232 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 PDE1AP54750 535 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 CCDC175P0C221 793 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 ASIC1P78348 528 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 Q6ZUG5 572 aa20.19■□□□□ 0.82
SKIDA1-202ENST00000449193 CYLC1P35663 651 aaPredicted RBP20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 NECAB1Q8N987 351 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 LRRC2Q9BYS8 371 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 KRT79Q5XKE5 535 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 RIMBP2O15034 1052 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 RNF113AO15541 343 aaKnown RBP20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 PRPHP41219 470 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 MICALCLQ6ZW33 695 aa20.18■□□□□ 0.82
SKIDA1-202ENST00000449193 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
SKIDA1-202ENST00000449193 SH2D4AQ9H788 454 aa20.17■□□□□ 0.82
SKIDA1-202ENST00000449193 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms