RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
SHANK2-209ENST00000445654 TM4SF4P48230 202 aa18.31■□□□□ 0.52
SHANK2-209ENST00000445654 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
SHANK2-209ENST00000445654 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
SHANK2-209ENST00000445654 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
SHANK2-209ENST00000445654 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 FKTNO75072 461 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
SHANK2-209ENST00000445654 NF2P35240 595 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 ZNF280AP59817 542 aaPredicted RBP18.3■□□□□ 0.52
SHANK2-209ENST00000445654 SCARF1Q14162 830 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 PDIA6Q15084 440 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
SHANK2-209ENST00000445654 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
SHANK2-209ENST00000445654 CFHR5Q9BXR6 569 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
SHANK2-209ENST00000445654 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
SHANK2-209ENST00000445654 DOK7Q18PE1 504 aa18.29■□□□□ 0.52
SHANK2-209ENST00000445654 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
SHANK2-209ENST00000445654 POLLQ9UGP5 575 aa18.29■□□□□ 0.52
SHANK2-209ENST00000445654 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
SHANK2-209ENST00000445654 ALDH1A1P00352 501 aa18.28■□□□□ 0.52
SHANK2-209ENST00000445654 GPSM2P81274 684 aa18.28■□□□□ 0.52
SHANK2-209ENST00000445654 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-209ENST00000445654 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
SHANK2-209ENST00000445654 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
SHANK2-209ENST00000445654 TAF1P21675 1872 aa18.28■□□□□ 0.52
SHANK2-209ENST00000445654 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
SHANK2-209ENST00000445654 CELF1Q92879 486 aaKnown RBP18.27■□□□□ 0.52
SHANK2-209ENST00000445654 RPS8P62241 208 aaKnown RBP18.26■□□□□ 0.51
SHANK2-209ENST00000445654 TTLL12Q14166 644 aaPredicted RBP18.26■□□□□ 0.51
SHANK2-209ENST00000445654 XAGE3Q8WTP9 111 aa18.26■□□□□ 0.51
SHANK2-209ENST00000445654 MYOZ2Q9NPC6 264 aa18.26■□□□□ 0.51
SHANK2-209ENST00000445654 KCNQ5Q9NR82 932 aa18.26■□□□□ 0.51
SHANK2-209ENST00000445654 USP17L8P0C7I0 530 aa18.25■□□□□ 0.51
SHANK2-209ENST00000445654 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
SHANK2-209ENST00000445654 ASTN2O75129 1339 aaPredicted RBP18.24■□□□□ 0.51
SHANK2-209ENST00000445654 PSME4Q14997 1843 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 UBE2Q2LH0YL09 131 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 UFL1O94874 794 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 MMP14P50281 582 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 INHBEP58166 350 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 PROSER3Q2NL68 480 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 ANKIB1Q9P2G1 1089 aa18.24■□□□□ 0.51
SHANK2-209ENST00000445654 ANXA1P04083 346 aa18.23■□□□□ 0.51
SHANK2-209ENST00000445654 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
SHANK2-209ENST00000445654 SCN9AQ15858 1988 aa18.22■□□□□ 0.51
SHANK2-209ENST00000445654 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
SHANK2-209ENST00000445654 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
SHANK2-209ENST00000445654 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
SHANK2-209ENST00000445654 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
SHANK2-209ENST00000445654 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
SHANK2-209ENST00000445654 USP17L3A6NCW0 530 aa18.21■□□□□ 0.51
SHANK2-209ENST00000445654 USP17L4A6NCW7 530 aa18.21■□□□□ 0.51
SHANK2-209ENST00000445654 LMOD3Q0VAK6 560 aa18.21■□□□□ 0.51
SHANK2-209ENST00000445654 USP17L1Q7RTZ2 530 aa18.21■□□□□ 0.51
SHANK2-209ENST00000445654 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
SHANK2-209ENST00000445654 CCER1Q8TC90 406 aaPredicted RBP18.21■□□□□ 0.51
SHANK2-209ENST00000445654 GMLQ99445 158 aa18.21■□□□□ 0.51
SHANK2-209ENST00000445654 ANKRD13DQ6ZTN6 518 aa18.2■□□□□ 0.5
SHANK2-209ENST00000445654 ISCA1Q9BUE6 129 aa18.2■□□□□ 0.5
SHANK2-209ENST00000445654 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
SHANK2-209ENST00000445654 MANSC4A6NHS7 340 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-209ENST00000445654 IRS4O14654 1257 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-209ENST00000445654 MOB2Q70IA6 237 aa18.19■□□□□ 0.5
SHANK2-209ENST00000445654 ERO1AQ96HE7 468 aa18.19■□□□□ 0.5
SHANK2-209ENST00000445654 TRIM17Q9Y577 477 aa18.19■□□□□ 0.5
SHANK2-209ENST00000445654 XDHP47989 1333 aa18.19■□□□□ 0.5
SHANK2-209ENST00000445654 FXR1P51114 621 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHANK2-209ENST00000445654 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
SHANK2-209ENST00000445654 ATP2B4P23634 1241 aa18.17■□□□□ 0.5
SHANK2-209ENST00000445654 CCDC152Q4G0S7 254 aa18.17■□□□□ 0.5
SHANK2-209ENST00000445654 OTOP1Q7RTM1 612 aa18.17■□□□□ 0.5
SHANK2-209ENST00000445654 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
SHANK2-209ENST00000445654 MKRN3Q13064 507 aaKnown RBP18.16■□□□□ 0.5
SHANK2-209ENST00000445654 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
SHANK2-209ENST00000445654 OTUD7BQ6GQQ9 843 aa18.16■□□□□ 0.5
SHANK2-209ENST00000445654 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
SHANK2-209ENST00000445654 COL1A1P02452 1464 aaPredicted RBP18.15■□□□□ 0.5
SHANK2-209ENST00000445654 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
SHANK2-209ENST00000445654 UNCXA6NJT0 531 aa18.15■□□□□ 0.5
SHANK2-209ENST00000445654 HOXB7P09629 217 aa18.15■□□□□ 0.5
SHANK2-209ENST00000445654 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
SHANK2-209ENST00000445654 PTPN12Q05209 780 aaKnown RBP18.15■□□□□ 0.5
SHANK2-209ENST00000445654 TMEM106CQ9BVX2 250 aa18.15■□□□□ 0.5
SHANK2-209ENST00000445654 ATP5J2-PTCD1G3V325 749 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 RIPK4P57078 832 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 ARHGEF6Q15052 776 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 NBPF9Q3BBW0 867 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 LDLRAD1Q5T700 205 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 ZBTB38Q8NAP3 1195 aaPredicted RBP18.14■□□□□ 0.49
SHANK2-209ENST00000445654 ARMC5Q96C12 935 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 SLC10A4Q96EP9 437 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 HYPKQ9NX55 129 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 PTPN22Q9Y2R2 807 aa18.14■□□□□ 0.49
SHANK2-209ENST00000445654 WNT10BO00744 389 aa18.13■□□□□ 0.49
SHANK2-209ENST00000445654 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
SHANK2-209ENST00000445654 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
SHANK2-209ENST00000445654 PRAMEF18Q5VWM3 479 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms