RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 CIAPIN1Q6FI81 312 aa28.29■■■□□ 2.12
LMBR1-211ENST00000444719 LDHDQ86WU2 507 aa28.29■■■□□ 2.12
LMBR1-211ENST00000444719 PODXL2Q9NZ53 605 aa28.29■■■□□ 2.12
LMBR1-211ENST00000444719 GGA1Q9UJY5 639 aa28.29■■■□□ 2.12
LMBR1-211ENST00000444719 RTL9Q8NET4 1388 aa28.28■■■□□ 2.12
LMBR1-211ENST00000444719 ITGA6P23229 1130 aa28.28■■■□□ 2.12
LMBR1-211ENST00000444719 FAM161AQ3B820 660 aa28.28■■■□□ 2.12
LMBR1-211ENST00000444719 SRCIN1Q9C0H9 1055 aa28.28■■■□□ 2.12
LMBR1-211ENST00000444719 CSF1RP07333 972 aa28.27■■■□□ 2.12
LMBR1-211ENST00000444719 ZC3H12CQ9C0D7 883 aaKnown RBP28.27■■■□□ 2.12
LMBR1-211ENST00000444719 C9orf78Q9NZ63 289 aaPredicted RBP28.27■■■□□ 2.12
LMBR1-211ENST00000444719 GRM8O00222 908 aa28.26■■■□□ 2.11
LMBR1-211ENST00000444719 ALDH1L1O75891 902 aa28.26■■■□□ 2.11
LMBR1-211ENST00000444719 TNIP1Q15025 636 aa28.26■■■□□ 2.11
LMBR1-211ENST00000444719 PNMA8AQ86V59 439 aaPredicted RBP28.26■■■□□ 2.11
LMBR1-211ENST00000444719 BSDC1Q9NW68 430 aaPredicted RBP28.26■■■□□ 2.11
LMBR1-211ENST00000444719 MINPP1Q9UNW1 487 aa28.26■■■□□ 2.11
LMBR1-211ENST00000444719 CHMP3Q9Y3E7 222 aa28.26■■■□□ 2.11
LMBR1-211ENST00000444719 XDHP47989 1333 aa28.25■■■□□ 2.11
LMBR1-211ENST00000444719 IGHMBP2P38935 993 aaKnown RBP28.25■■■□□ 2.11
LMBR1-211ENST00000444719 GMPSP49915 693 aaPredicted RBP28.25■■■□□ 2.11
LMBR1-211ENST00000444719 FOXO4P98177 505 aa28.25■■■□□ 2.11
LMBR1-211ENST00000444719 WTIPA6NIX2 430 aaPredicted RBP28.24■■■□□ 2.11
LMBR1-211ENST00000444719 G3V3G9 751 aa28.24■■■□□ 2.11
LMBR1-211ENST00000444719 ECE2O60344 883 aa28.24■■■□□ 2.11
LMBR1-211ENST00000444719 DCAF8Q5TAQ9 597 aa28.24■■■□□ 2.11
LMBR1-211ENST00000444719 KCNQ5Q9NR82 932 aa28.24■■■□□ 2.11
LMBR1-211ENST00000444719 SMC4Q9NTJ3 1288 aa28.24■■■□□ 2.11
LMBR1-211ENST00000444719 ADAMTSL1Q8N6G6 1762 aa28.24■■■□□ 2.11
LMBR1-211ENST00000444719 EPHA10Q5JZY3 1008 aa28.23■■■□□ 2.11
LMBR1-211ENST00000444719 DNAJC5GQ8N7S2 189 aa28.23■■■□□ 2.11
LMBR1-211ENST00000444719 GPRC5DQ9NZD1 345 aa28.23■■■□□ 2.11
LMBR1-211ENST00000444719 PTPRCP08575 1304 aa28.22■■■□□ 2.11
LMBR1-211ENST00000444719 ALDH1L2Q3SY69 923 aa28.22■■■□□ 2.11
LMBR1-211ENST00000444719 MPHOSPH8Q99549 860 aa28.22■■■□□ 2.11
LMBR1-211ENST00000444719 SCN9AQ15858 1988 aa28.21■■■□□ 2.11
LMBR1-211ENST00000444719 ANKRD18BA2A2Z9 1011 aa28.21■■■□□ 2.11
LMBR1-211ENST00000444719 PSMD14O00487 310 aa28.21■■■□□ 2.11
LMBR1-211ENST00000444719 ATP2B4P23634 1241 aa28.21■■■□□ 2.11
LMBR1-211ENST00000444719 MAP1SQ66K74 1059 aaPredicted RBP28.21■■■□□ 2.11
LMBR1-211ENST00000444719 LMBR1LQ6UX01 489 aa28.21■■■□□ 2.11
LMBR1-211ENST00000444719 ZBTB12Q9Y330 459 aaPredicted RBP28.21■■■□□ 2.11
LMBR1-211ENST00000444719 IFIT5Q13325 482 aaKnown RBP28.2■■■□□ 2.1
LMBR1-211ENST00000444719 SHTN1A0MZ66 631 aa28.18■■■□□ 2.1
LMBR1-211ENST00000444719 NBPF7P0C2Y1 421 aaPredicted RBP28.18■■■□□ 2.1
LMBR1-211ENST00000444719 CCT4P50991 539 aaKnown RBP28.18■■■□□ 2.1
LMBR1-211ENST00000444719 HNRNPUQ00839 825 aaKnown RBP eCLIP28.18■■■□□ 2.1
LMBR1-211ENST00000444719 SUCLG2Q96I99 432 aa28.18■■■□□ 2.1
LMBR1-211ENST00000444719 ADARB2Q9NS39 739 aaKnown RBP28.18■■■□□ 2.1
LMBR1-211ENST00000444719 ITGBL1O95965 494 aaPredicted RBP28.17■■■□□ 2.1
LMBR1-211ENST00000444719 USP50Q70EL3 339 aaPredicted RBP28.17■■■□□ 2.1
LMBR1-211ENST00000444719 CNTROBQ8N137 903 aa28.17■■■□□ 2.1
LMBR1-211ENST00000444719 CNOT7Q9UIV1 285 aaKnown RBP28.17■■■□□ 2.1
LMBR1-211ENST00000444719 CT47B1P0C2W7 299 aaPredicted RBP28.16■■■□□ 2.1
LMBR1-211ENST00000444719 CCDC57Q2TAC2 916 aa28.15■■■□□ 2.1
LMBR1-211ENST00000444719 ZNF594Q96JF6 807 aaPredicted RBP28.15■■■□□ 2.1
LMBR1-211ENST00000444719 PASKQ96RG2 1323 aa28.15■■■□□ 2.1
LMBR1-211ENST00000444719 CHRNDQ07001 517 aa28.14■■■□□ 2.1
LMBR1-211ENST00000444719 MICALL2Q8IY33 904 aa28.14■■■□□ 2.1
LMBR1-211ENST00000444719 KAZALD1Q96I82 304 aa28.14■■■□□ 2.1
LMBR1-211ENST00000444719 ANKRD2Q9GZV1 360 aa28.14■■■□□ 2.1
LMBR1-211ENST00000444719 NOB1Q9ULX3 412 aaKnown RBP28.14■■■□□ 2.1
LMBR1-211ENST00000444719 TAF7LQ5H9L4 462 aa28.13■■■□□ 2.09
LMBR1-211ENST00000444719 HELBQ8NG08 1087 aaPredicted RBP28.13■■■□□ 2.09
LMBR1-211ENST00000444719 KLRG1Q96E93 195 aa28.13■■■□□ 2.09
LMBR1-211ENST00000444719 LEMD3Q9Y2U8 911 aa28.13■■■□□ 2.09
LMBR1-211ENST00000444719 UTYO14607 1347 aa28.13■■■□□ 2.09
LMBR1-211ENST00000444719 H7C1D1 291 aa28.12■■■□□ 2.09
LMBR1-211ENST00000444719 TXNRD3Q86VQ6 643 aa28.12■■■□□ 2.09
LMBR1-211ENST00000444719 PSME4Q14997 1843 aa28.12■■■□□ 2.09
LMBR1-211ENST00000444719 ZNF804BA4D1E1 1349 aa28.12■■■□□ 2.09
LMBR1-211ENST00000444719 A0A1B0GUL6 1792 aa28.11■■■□□ 2.09
LMBR1-211ENST00000444719 TAF5LO75529 589 aa28.11■■■□□ 2.09
LMBR1-211ENST00000444719 VIL1P09327 827 aaKnown RBP28.11■■■□□ 2.09
LMBR1-211ENST00000444719 RARSP54136 660 aaKnown RBP28.11■■■□□ 2.09
LMBR1-211ENST00000444719 TRPM4Q8TD43 1214 aa28.11■■■□□ 2.09
LMBR1-211ENST00000444719 DPF2Q92785 391 aa28.11■■■□□ 2.09
LMBR1-211ENST00000444719 MED23Q9ULK4 1368 aa28.11■■■□□ 2.09
LMBR1-211ENST00000444719 SNAP23O00161 211 aa28.1■■■□□ 2.09
LMBR1-211ENST00000444719 KLRK1P26718 216 aa28.1■■■□□ 2.09
LMBR1-211ENST00000444719 KCNJ4P48050 445 aa28.1■■■□□ 2.09
LMBR1-211ENST00000444719 HIRAP54198 1017 aaPredicted RBP28.1■■■□□ 2.09
LMBR1-211ENST00000444719 SAMD7Q7Z3H4 446 aa28.1■■■□□ 2.09
LMBR1-211ENST00000444719 USP44Q9H0E7 712 aa28.1■■■□□ 2.09
LMBR1-211ENST00000444719 BICC1Q9H694 974 aaKnown RBP28.1■■■□□ 2.09
LMBR1-211ENST00000444719 CREBZFQ9NS37 354 aa28.1■■■□□ 2.09
LMBR1-211ENST00000444719 PLIN1O60240 522 aa28.09■■■□□ 2.09
LMBR1-211ENST00000444719 FMR1Q06787 632 aaKnown RBP eCLIP28.09■■■□□ 2.091e-12■■■■□ 24.2
LMBR1-211ENST00000444719 LDHAL6AQ6ZMR3 332 aa28.09■■■□□ 2.09
LMBR1-211ENST00000444719 RPS12P25398 132 aaKnown RBP28.08■■■□□ 2.09
LMBR1-211ENST00000444719 RBM26Q5T8P6 1007 aaKnown RBP28.08■■■□□ 2.09
LMBR1-211ENST00000444719 PODNQ7Z5L7 613 aa28.08■■■□□ 2.09
LMBR1-211ENST00000444719 CNNM1Q9NRU3 951 aa28.08■■■□□ 2.09
LMBR1-211ENST00000444719 POLR2AP24928 1970 aaKnown RBP28.08■■■□□ 2.09
LMBR1-211ENST00000444719 TBC1D10BQ4KMP7 808 aaPredicted RBP28.07■■■□□ 2.08
LMBR1-211ENST00000444719 USP17L3A6NCW0 530 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 USP17L4A6NCW7 530 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 TMEM88BA6NKF7 163 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 TRAF5O00463 557 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 EGFRP00533 1210 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms