RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 NBPF9Q3BBW0 867 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 GBP7Q8N8V2 638 aaPredicted RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 PSDA5PKW4 1024 aaPredicted RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CREB3O43889 395 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 MAP3K9P80192 1104 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 HLTFQ14527 1009 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CFAP58Q5T655 872 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 TSR2Q969E8 191 aaKnown RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CFAP74Q9C0B2 1584 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 EVC2Q86UK5 1308 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 GPATCH8Q9UKJ3 1502 aaKnown RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 FRMD3A2A2Y4 597 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 ELF1P32519 619 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CCT5P48643 541 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 STK3Q13188 491 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 SAMD9Q5K651 1589 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 GPT2Q8TD30 523 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 DTNBP1Q96EV8 351 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 ERBINQ96RT1 1412 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CAPS2Q9BXY5 557 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 TRIM7Q9C029 511 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 STMN4Q9H169 189 aaPredicted RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CBX8Q9HC52 389 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 GOLGA8KD6RF30 607 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 DESP17661 470 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CDC25BP30305 580 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 VAV2P52735 878 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 DYNC1I2Q13409 638 aaKnown RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC92Q53HC0 331 aaPredicted RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 GBP5Q96PP8 586 aa5.87□□□□□ -1.47
SCN11A-202ENST00000444237 ACTR5Q9H9F9 607 aaPredicted RBP5.87□□□□□ -1.47
SCN11A-202ENST00000444237 NLRP5P59047 1200 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 GNGT1P63211 74 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 FBXO31Q5XUX0 539 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 RALYLQ86SE5 291 aaKnown RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 TTC14Q96N46 770 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC113Q9H0I3 377 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 PDE11AQ9HCR9 933 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 RPGRIP1LQ68CZ1 1315 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 TTC41PQ6P2S7 1318 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC151A5D8V7 595 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 ISM2Q6H9L7 571 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 NUP88Q99567 741 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 TSC22D3Q99576 134 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 FSD1Q9BTV5 496 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 JADE2Q9NQC1 790 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 RNF216Q9NWF9 866 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 STIM2Q9P246 746 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 ADAM21Q9UKJ8 722 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 KIAA1107Q9UPP5 1409 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC160A6NGH7 325 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 ARHGAP6O43182 974 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 DNM1Q05193 864 aaKnown RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 PNMA8AQ86V59 439 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 WHAMMQ8TF30 809 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 FAM212AQ96EL1 285 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 UTP14AQ9BVJ6 771 aaKnown RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 FAM204AQ9H8W3 233 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 ABCC11Q96J66 1382 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 CTIFO43310 598 aaKnown RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 NBPF7P0C2Y1 421 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 UBTFL1P0CB47 393 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 TRIM27P14373 513 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 GCFC2P16383 781 aaKnown RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 XBP1P17861 261 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 CCT4P50991 539 aaKnown RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 TWISTNBQ3B726 338 aaPredicted RBP5.86□□□□□ -1.47
SCN11A-202ENST00000444237 KMT5BQ4FZB7 885 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC174Q6PII3 467 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 BATF3Q9NR55 127 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 MRFAP1Q9Y605 127 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 ABCC5O15440 1437 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 NAIPQ13075 1403 aa5.86□□□□□ -1.47
SCN11A-202ENST00000444237 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 LONRF2Q1L5Z9 754 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 ZNF569Q5MCW4 686 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 LRRC8AQ8IWT6 810 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CCHCR1Q8TD31 782 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 NAPGQ99747 312 aaPredicted RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 IFNKQ9P0W0 207 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 PHLPP2Q6ZVD8 1323 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CLASP1Q7Z460 1538 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 GIGYF1O75420 1035 aaPredicted RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 BRD1O95696 1058 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 EPS15P42566 896 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 RPGRIP1Q96KN7 1286 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CTAGE1Q96RT6 745 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 BAG1Q99933 345 aaPredicted RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CLSTN2Q9H4D0 955 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 TFIP11Q9UBB9 837 aaKnown RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 PARD3Q8TEW0 1356 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 TRIM66O15016 1216 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 PPP1R12CQ9BZL4 782 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 PSD3Q9NYI0 1048 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 TRAPPC8Q9Y2L5 1435 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CFAP43Q8NDM7 1665 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms