RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 PRR20DP86480 221 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 PRR20BP86481 221 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 PRR20AP86496 221 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 PTK7Q13308 1070 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 FAM200AQ8TCP9 573 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 TOR4AQ9NXH8 423 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 PDZRN3Q9UPQ7 1066 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 FLT4P35916 1363 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 WDR4P57081 412 aaKnown RBP9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 DPYDQ12882 1025 aa9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 ELOAQ14241 798 aaKnown RBP9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 ANKMY2Q8IV38 441 aa9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 PNNQ9H307 717 aaKnown RBP9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 NUDCQ9Y266 331 aa9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 PCDHGA11Q9Y5H2 935 aa9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
R3HDM1-210ENST00000443537 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 SMPD1P17405 629 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 MTHFSP49914 203 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 WDR43Q15061 677 aaKnown RBP eCLIP9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 STK32AQ8WU08 396 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 LRRC59Q96AG4 307 aaKnown RBP9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 ZMIZ1Q9ULJ6 1067 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 BLMP54132 1417 aaPredicted RBP9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 COL3A1P02461 1466 aaPredicted RBP9.44□□□□□ -0.9
R3HDM1-210ENST00000443537 CPDO75976 1380 aa9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 PLEKHG2Q9H7P9 1386 aa9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 LILRA1O75019 489 aa9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 KIAA1024Q9UPX6 916 aa9.43□□□□□ -0.9
R3HDM1-210ENST00000443537 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
R3HDM1-210ENST00000443537 TMEM164Q5U3C3 297 aa9.42□□□□□ -0.9
R3HDM1-210ENST00000443537 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
R3HDM1-210ENST00000443537 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
R3HDM1-210ENST00000443537 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
R3HDM1-210ENST00000443537 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
R3HDM1-210ENST00000443537 CARNS1A5YM72 827 aa9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 SEC13P55735 322 aa9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 CBLBQ13191 982 aa9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 SIX5Q8N196 739 aa9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 HPS1Q92902 700 aa9.41□□□□□ -0.9
R3HDM1-210ENST00000443537 SFI1A8K8P3 1242 aa9.4□□□□□ -0.9
R3HDM1-210ENST00000443537 UBAP1LF5GYI3 381 aa9.4□□□□□ -0.9
R3HDM1-210ENST00000443537 GCP02774 474 aa9.4□□□□□ -0.9
R3HDM1-210ENST00000443537 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
R3HDM1-210ENST00000443537 CNGB1Q14028 1251 aaPredicted RBP9.4□□□□□ -0.9
R3HDM1-210ENST00000443537 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
R3HDM1-210ENST00000443537 COL14A1Q05707 1796 aaKnown RBP9.4□□□□□ -0.91
R3HDM1-210ENST00000443537 CAMTA1Q9Y6Y1 1673 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 MAP3K19Q56UN5 1328 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 FAM187AA6NFU0 413 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 NEFMP07197 916 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 ADH1AP07327 375 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 TIMP2P16035 220 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 AMPHP49418 695 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 COL18A1P39060 1754 aa9.39□□□□□ -0.91
R3HDM1-210ENST00000443537 STAU1O95793 577 aaKnown RBP9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 GNRH1P01148 92 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 GDF10P55107 478 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 XPCQ01831 940 aaPredicted RBP9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 ARHGEF25Q86VW2 580 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 IP6K1Q92551 441 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 ARHGEF10LQ9HCE6 1279 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 RAB6BQ9NRW1 208 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 NWD2Q9ULI1 1742 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 LMO7Q8WWI1 1683 aa9.38□□□□□ -0.91
R3HDM1-210ENST00000443537 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 PPM1GO15355 546 aaPredicted RBP9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 HOXC9P31274 260 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 RELBQ01201 579 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 RRS1Q15050 365 aaKnown RBP9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 AGBL1Q96MI9 1066 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 KLF16Q9BXK1 252 aaPredicted RBP9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 ZNF358Q9NW07 568 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 JCADQ9P266 1359 aa9.37□□□□□ -0.91
R3HDM1-210ENST00000443537 BACH1O14867 736 aa9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 GFRA3O60609 400 aa9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 IL13P35225 146 aa9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 CCDC184Q52MB2 194 aa9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
R3HDM1-210ENST00000443537 KDRP35968 1356 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms