RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 BLMP54132 1417 aaPredicted RBP3.25□□□□□ -1.89
LIG4-203ENST00000442234 NCOR1O75376 2440 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 GPATCH8Q9UKJ3 1502 aaKnown RBP3.25□□□□□ -1.89
LIG4-203ENST00000442234 CSPG5O95196 566 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 IL2RBP14784 551 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 GCKP35557 465 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 CABP4P57796 275 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 FAM161BQ96MY7 647 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 FAM135BQ49AJ0 1406 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 CASKIN1Q8WXD9 1431 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 SAMD9Q5K651 1589 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 CRYBG1Q9Y4K1 1723 aa3.25□□□□□ -1.89
LIG4-203ENST00000442234 NCOA2Q15596 1464 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 RTEL1-TNFRSF6BF6WH68 1400 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 KIF2AO00139 706 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 DDNO94850 711 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 ADCY5O95622 1261 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 MBD3O95983 291 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 DPEP1P16444 411 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 PEX19P40855 299 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 CCT2P78371 535 aaKnown RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 RAB3GAP1Q15042 981 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 MUM1L1Q5H9M0 696 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 RNF20Q5VTR2 975 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 SMYD5Q6GMV2 418 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 MORC1Q86VD1 984 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 COL23A1Q86Y22 540 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 ANKRD18AQ8IVF6 992 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 SYNE4Q8N205 404 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 MRFAP1L1Q96HT8 127 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 CAMKK2Q96RR4 588 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 TRIM6Q9C030 488 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 RMI1Q9H9A7 625 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 VEZTQ9HBM0 779 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 CHMP3Q9Y3E7 222 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 RTCBQ9Y3I0 505 aaKnown RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 USP47Q96K76 1375 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 KDM5AP29375 1690 aaKnown RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 WASLO00401 505 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 SCP2P22307 547 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 PAX7P23759 505 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 GNL2Q13823 731 aaKnown RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 ARSIQ5FYB1 569 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 TRAPPC3LQ5T215 181 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 DLK2Q6UY11 383 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 GOLGA5Q8TBA6 731 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 ZCRB1Q8TBF4 217 aaKnown RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.24□□□□□ -1.89
LIG4-203ENST00000442234 JAG2Q9Y219 1238 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 PAXBP1Q9Y5B6 917 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 PTPN23Q9H3S7 1636 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 IBTKQ9P2D0 1353 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 KDM2BQ8NHM5 1336 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 HFM1A2PYH4 1435 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 A0A1B0GUA9 196 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 KLHL33A6NCF5 533 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 ELL2O00472 640 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 MAP3K9P80192 1104 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 ELF2Q15723 593 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 C1orf141Q5JVX7 400 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 PRAMEF18Q5VWM3 479 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 OLFM4Q6UX06 510 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 NFXL1Q6ZNB6 911 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 LAPTM4BQ86VI4 370 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 WDR63Q8IWG1 891 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 SH3GL3Q99963 347 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 ACBD3Q9H3P7 528 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 KDM4CQ9H3R0 1056 aa3.24□□□□□ -1.89
LIG4-203ENST00000442234 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.24□□□□□ -1.89
LIG4-203ENST00000442234 CENPFP49454 3210 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 USP19O94966 1318 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ATRXP46100 2492 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ERCC3P19447 782 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ABCD1P33897 745 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 NAA30Q147X3 362 aaPredicted RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 SYCP1Q15431 976 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 PACS2Q86VP3 889 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 PNISRQ8TF01 805 aaKnown RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 DDX11Q96FC9 970 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CEP89Q96ST8 783 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 PDRG1Q9NUG6 133 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ETAA1Q9NY74 926 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 LCMT1Q9UIC8 334 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CCDC7Q96M83 1385 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CEP250Q9BV73 2442 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 NEURL4Q96JN8 1562 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 RP1L1Q8IWN7 2480 aaPredicted RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 ABCA8O94911 1581 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ARHGAP33O14559 1287 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 TRPA1O75762 1119 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CLNS1AP54105 237 aaKnown RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 DGKZQ13574 1117 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CYP4F22Q6NT55 531 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ZNF530Q6P9A1 599 aaPredicted RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 CCDC186Q7Z3E2 898 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 TTC5Q8N0Z6 440 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 FBXO18Q8NFZ0 1043 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 N4BP2L2Q92802 583 aaPredicted RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 FAM107BQ9H098 131 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 LRRC4BQ9NT99 713 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms