RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 ST8SIA5O15466 376 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 CCNYL3P0C7X3 344 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 CNGB1Q14028 1251 aaPredicted RBP9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 SNIP1Q8TAD8 396 aaKnown RBP9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 PANK3Q9H999 370 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 COL5A3P25940 1745 aaPredicted RBP9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 INSRP06213 1382 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 FLT4P35916 1363 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 KDRP35968 1356 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 PLEKHG2Q9H7P9 1386 aa9.21□□□□□ -0.94
UBE2D4-203ENST00000440652 ARFGEF1Q9Y6D6 1849 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 HSPA1AP0DMV8 641 aaKnown RBP9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 HSPA1BP0DMV9 641 aaKnown RBP9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 SMPD1P17405 629 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 PRELPP51888 382 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 RIC3Q7Z5B4 369 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 EVA1BQ9NVM1 165 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 TMOD3Q9NYL9 352 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 RNF181Q9P0P0 153 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
UBE2D4-203ENST00000440652 TIAM2Q8IVF5 1701 aa9.19□□□□□ -0.94
UBE2D4-203ENST00000440652 RASSF7Q02833 373 aa9.19□□□□□ -0.94
UBE2D4-203ENST00000440652 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
UBE2D4-203ENST00000440652 RRAGCQ9HB90 399 aa9.19□□□□□ -0.94
UBE2D4-203ENST00000440652 KNSTRNQ9Y448 316 aa9.19□□□□□ -0.94
UBE2D4-203ENST00000440652 GTF3C3Q9Y5Q9 886 aa9.19□□□□□ -0.94
UBE2D4-203ENST00000440652 POTECB2RU33 542 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 CFAP99D6REC4 459 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 FYB1O15117 783 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 PER1O15534 1290 aaPredicted RBP9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 CHRNA5P30532 468 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 TGFB2P61812 414 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 NCAPD2Q15021 1401 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 PRPF38BQ5VTL8 546 aaKnown RBP9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 FAM9BQ8IZU0 186 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 SLC4A9Q96Q91 983 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 ATG3Q9NT62 314 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 CCDC87Q9NVE4 849 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 ANKRD26Q9UPS8 1709 aa9.18□□□□□ -0.94
UBE2D4-203ENST00000440652 KDM2BQ8NHM5 1336 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 MYBBP1AQ9BQG0 1328 aaKnown RBP9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 GYS1P13807 737 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 KCNA3P22001 575 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 HNRNPUQ00839 825 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 FSTL1Q12841 308 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 LYPD8Q6UX82 237 aa9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 PUS7Q96PZ0 661 aaKnown RBP9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 RTCBQ9Y3I0 505 aaKnown RBP9.17□□□□□ -0.94
UBE2D4-203ENST00000440652 J3QL48 77 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 SIAH2O43255 324 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 DDR1Q08345 913 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 CCDC184Q52MB2 194 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 TRAPPC3LQ5T215 181 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 ZBTB3Q9H5J0 574 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
UBE2D4-203ENST00000440652 TJP1Q07157 1748 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 PHKG2P15735 406 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 RFC4P35249 363 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 SH3BP2P78314 561 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 SMC1BQ8NDV3 1235 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 DCAF5Q96JK2 942 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 SPG7Q9UQ90 795 aa9.15□□□□□ -0.94
UBE2D4-203ENST00000440652 KDM6AO15550 1401 aaPredicted RBP9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 MYH14Q7Z406 1995 aaKnown RBP9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 LILRB3O75022 631 aa9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 QPCTQ16769 361 aa9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 DALRD3Q5D0E6 543 aaKnown RBP9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 PIM2Q9P1W9 311 aa9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 SBF1O95248 1867 aa9.14□□□□□ -0.95
UBE2D4-203ENST00000440652 ZNF831Q5JPB2 1677 aa9.13□□□□□ -0.95
UBE2D4-203ENST00000440652 CNTNAP4Q9C0A0 1308 aa9.13□□□□□ -0.95
UBE2D4-203ENST00000440652 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
UBE2D4-203ENST00000440652 CC2D1BQ5T0F9 858 aaKnown RBP9.13□□□□□ -0.95
UBE2D4-203ENST00000440652 PNISRQ8TF01 805 aaKnown RBP9.13□□□□□ -0.95
UBE2D4-203ENST00000440652 ADAMTS7Q9UKP4 1686 aa9.13□□□□□ -0.95
UBE2D4-203ENST00000440652 KIF24Q5T7B8 1368 aa9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 USP42Q9H9J4 1324 aaKnown RBP9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 AXIN1O15169 862 aa9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 F12P00748 615 aaPredicted RBP9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 IFNL2Q8IZJ0 200 aa9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 MKRN1Q9UHC7 482 aaKnown RBP9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 CARMIL3Q8ND23 1372 aa9.12□□□□□ -0.95
UBE2D4-203ENST00000440652 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms