RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ISCA1Q9BUE6 129 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 MXD3Q9BW11 206 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 SRCIN1Q9C0H9 1055 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 ZNF408Q9H9D4 720 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 UFL1O94874 794 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 RPS8P62241 208 aaKnown RBP5.85□□□□□ -1.47
EDEM3-203ENST00000439962 DPY19L2Q6NUT2 758 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 ERBB4Q15303 1308 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 ZNF541Q9H0D2 1346 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 KLRK1P26718 216 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 RBM25P49756 843 aaKnown RBP5.85□□□□□ -1.47
EDEM3-203ENST00000439962 CCDC152Q4G0S7 254 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 INTS3Q68E01 1043 aaKnown RBP5.85□□□□□ -1.47
EDEM3-203ENST00000439962 PAXIP1Q6ZW49 1069 aaPredicted RBP5.85□□□□□ -1.47
EDEM3-203ENST00000439962 CCDC191Q8NCU4 936 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 SNX21Q969T3 373 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 ZBTB7BO15156 539 aaPredicted RBP5.84□□□□□ -1.47
EDEM3-203ENST00000439962 CTSWP56202 376 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 GPSM2P81274 684 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 WASHC4Q2M389 1173 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 STYK1Q6J9G0 422 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 ANKRD18AQ8IVF6 992 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 ITPRIPQ8IWB1 547 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 TMEM57Q8N5G2 664 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 TTLL11Q8NHH1 800 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 SUCLG2Q96I99 432 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 PUS3Q9BZE2 481 aaKnown RBP5.84□□□□□ -1.47
EDEM3-203ENST00000439962 CNNM1Q9NRU3 951 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 POLLQ9UGP5 575 aa5.84□□□□□ -1.47
EDEM3-203ENST00000439962 IBTKQ9P2D0 1353 aaPredicted RBP5.84□□□□□ -1.47
EDEM3-203ENST00000439962 GRM8O00222 908 aa5.84□□□□□ -1.48
EDEM3-203ENST00000439962 PDE8AO60658 829 aa5.84□□□□□ -1.48
EDEM3-203ENST00000439962 IARSP41252 1262 aaKnown RBP5.84□□□□□ -1.48
EDEM3-203ENST00000439962 GRAPQ13588 217 aa5.84□□□□□ -1.48
EDEM3-203ENST00000439962 CCDC57Q2TAC2 916 aa5.84□□□□□ -1.48
EDEM3-203ENST00000439962 BEND3Q5T5X7 828 aa5.84□□□□□ -1.48
EDEM3-203ENST00000439962 MAP1SQ66K74 1059 aaPredicted RBP5.84□□□□□ -1.48
EDEM3-203ENST00000439962 GRAPLQ8TC17 118 aaPredicted RBP5.84□□□□□ -1.48
EDEM3-203ENST00000439962 MEIS3Q99687 375 aa5.84□□□□□ -1.48
EDEM3-203ENST00000439962 BICC1Q9H694 974 aaKnown RBP5.84□□□□□ -1.48
EDEM3-203ENST00000439962 PA2G4Q9UQ80 394 aaKnown RBP5.84□□□□□ -1.48
EDEM3-203ENST00000439962 FRAT2O75474 233 aaPredicted RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 EPS15P42566 896 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 IFIT5Q13325 482 aaKnown RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 NFKBIBQ15653 356 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 CRY2Q49AN0 593 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 LDHAL6AQ6ZMR3 332 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 TXNRD3Q86VQ6 643 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 RPAP2Q8IXW5 612 aaPredicted RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 NIM1KQ8IY84 436 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 LINS1Q8NG48 757 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 ZC3H12CQ9C0D7 883 aaKnown RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 CIZ1Q9ULV3 898 aaPredicted RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 PCCAP05165 728 aaPredicted RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 CHD1LQ86WJ1 897 aa5.83□□□□□ -1.48
EDEM3-203ENST00000439962 ISY1Q9ULR0 285 aaKnown RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 LRRFIP2Q9Y608 721 aaKnown RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 TNRC6CQ9HCJ0 1690 aaKnown RBP5.83□□□□□ -1.48
EDEM3-203ENST00000439962 ANKRD31Q8N7Z5 1873 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 EPB41L2O43491 1005 aaKnown RBP5.82□□□□□ -1.48
EDEM3-203ENST00000439962 EIF6P56537 245 aaKnown RBP5.82□□□□□ -1.48
EDEM3-203ENST00000439962 C1QTNF8P60827 252 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 FKBP4Q02790 459 aaKnown RBP eCLIP5.82□□□□□ -1.48
EDEM3-203ENST00000439962 GSE1Q14687 1217 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 PRAMEF18Q5VWM3 479 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 SAMD7Q7Z3H4 446 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 RTKN2Q8IZC4 609 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 C7orf43Q8WVR3 580 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 ATP6V0A2Q9Y487 856 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 CCDC88AQ3V6T2 1871 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 CHD4Q14839 1912 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 EGFRP00533 1210 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 CHAF1AQ13111 956 aaPredicted RBP5.82□□□□□ -1.48
EDEM3-203ENST00000439962 PRKG1Q13976 671 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 TBC1D10BQ4KMP7 808 aaPredicted RBP5.82□□□□□ -1.48
EDEM3-203ENST00000439962 LRRC24Q50LG9 513 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 ANTXR1Q9H6X2 564 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 COL4A1P02462 1669 aa5.82□□□□□ -1.48
EDEM3-203ENST00000439962 COL11A2P13942 1736 aaPredicted RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 ANKRD18BA2A2Z9 1011 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 GLTPD2A6NH11 291 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 KIF3CO14782 793 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 BBOX1O75936 387 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 UBTFL1P0CB47 393 aaPredicted RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 NBR1Q14596 966 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 C22orf23Q9BZE7 217 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 USP44Q9H0E7 712 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 GGA1Q9UJY5 639 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 QSER1Q2KHR3 1735 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 LAMA2P24043 3122 aaKnown RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 SCN7AQ01118 1682 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 VEGFAP15692 232 aaPredicted RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 GYG1P46976 350 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 RBM5P52756 815 aaKnown RBP eCLIP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 CHRNDQ07001 517 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 CXCL9Q07325 125 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 VPS37DQ86XT2 251 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 KIAA0825Q8IV33 1275 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 TBC1D16Q8TBP0 767 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms