RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SURF6O75683 361 aaKnown RBP22.8■■□□□ 1.24
HDAC6-208ENST00000438518 G3BP1Q13283 466 aaKnown RBP eCLIP22.8■■□□□ 1.248e-6■□□□□ 9
HDAC6-208ENST00000438518 ANKRD2Q9GZV1 360 aa22.8■■□□□ 1.24
HDAC6-208ENST00000438518 LTBP1Q14766 1721 aa22.79■■□□□ 1.24
HDAC6-208ENST00000438518 KLHDC4Q8TBB5 520 aa22.79■■□□□ 1.24
HDAC6-208ENST00000438518 GCC1Q96CN9 775 aa22.79■■□□□ 1.24
HDAC6-208ENST00000438518 DCTPP1Q9H773 170 aa22.79■■□□□ 1.24
HDAC6-208ENST00000438518 RIPOR2Q9Y4F9 1068 aa22.79■■□□□ 1.24
HDAC6-208ENST00000438518 RAB11FIP3O75154 756 aa22.78■■□□□ 1.24
HDAC6-208ENST00000438518 C7orf43Q8WVR3 580 aa22.78■■□□□ 1.24
HDAC6-208ENST00000438518 PA2G4Q9UQ80 394 aaKnown RBP22.78■■□□□ 1.24
HDAC6-208ENST00000438518 CCDC93Q567U6 631 aa22.77■■□□□ 1.24
HDAC6-208ENST00000438518 SIL1Q9H173 461 aa22.77■■□□□ 1.24
HDAC6-208ENST00000438518 PODXL2Q9NZ53 605 aa22.77■■□□□ 1.24
HDAC6-208ENST00000438518 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
HDAC6-208ENST00000438518 CHRNDQ07001 517 aa22.76■■□□□ 1.23
HDAC6-208ENST00000438518 OS9Q13438 667 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-208ENST00000438518 ATG9AQ7Z3C6 839 aa22.76■■□□□ 1.23
HDAC6-208ENST00000438518 RTKN2Q8IZC4 609 aa22.76■■□□□ 1.23
HDAC6-208ENST00000438518 BCS1LQ9Y276 419 aa22.76■■□□□ 1.23
HDAC6-208ENST00000438518 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
HDAC6-208ENST00000438518 XDHP47989 1333 aa22.76■■□□□ 1.23
HDAC6-208ENST00000438518 SNED1Q8TER0 1413 aa22.75■■□□□ 1.23
HDAC6-208ENST00000438518 LRRC24Q50LG9 513 aa22.75■■□□□ 1.23
HDAC6-208ENST00000438518 METTL24Q5JXM2 366 aa22.75■■□□□ 1.23
HDAC6-208ENST00000438518 KIF1BPQ96EK5 621 aa22.75■■□□□ 1.23
HDAC6-208ENST00000438518 PUS3Q9BZE2 481 aaKnown RBP22.75■■□□□ 1.23
HDAC6-208ENST00000438518 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
HDAC6-208ENST00000438518 C21orf2O43822 256 aa22.74■■□□□ 1.23
HDAC6-208ENST00000438518 CEP126Q9P2H0 1117 aa22.74■■□□□ 1.23
HDAC6-208ENST00000438518 EXOC6BQ9Y2D4 811 aa22.74■■□□□ 1.23
HDAC6-208ENST00000438518 LEMD3Q9Y2U8 911 aa22.74■■□□□ 1.23
HDAC6-208ENST00000438518 PDE8BO95263 885 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 ATP2B4P23634 1241 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 SMC5Q8IY18 1101 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 MPNDQ8N594 471 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 GPR108Q9NPR9 543 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 ANKIB1Q9P2G1 1089 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 AKAP2Q9Y2D5 859 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 ARAP2Q8WZ64 1704 aa22.73■■□□□ 1.23
HDAC6-208ENST00000438518 VGLL2Q8N8G2 317 aa22.72■■□□□ 1.23
HDAC6-208ENST00000438518 SUPT20HQ8NEM7 779 aa22.72■■□□□ 1.23
HDAC6-208ENST00000438518 CCDC136Q96JN2 1154 aa22.72■■□□□ 1.23
HDAC6-208ENST00000438518 NSFL1CQ9UNZ2 370 aaKnown RBP22.72■■□□□ 1.23
HDAC6-208ENST00000438518 SASH1O94885 1247 aa22.71■■□□□ 1.23
HDAC6-208ENST00000438518 UBE4AQ14139 1066 aa22.71■■□□□ 1.23
HDAC6-208ENST00000438518 DPP8Q6V1X1 898 aaPredicted RBP22.71■■□□□ 1.23
HDAC6-208ENST00000438518 PSMD1Q99460 953 aa22.71■■□□□ 1.23
HDAC6-208ENST00000438518 RTFDC1Q9BY42 306 aaPredicted RBP22.71■■□□□ 1.23
HDAC6-208ENST00000438518 LRRCC1Q9C099 1032 aa22.71■■□□□ 1.23
HDAC6-208ENST00000438518 GGA1Q9UJY5 639 aa22.71■■□□□ 1.23
HDAC6-208ENST00000438518 DUOX1Q9NRD9 1551 aa22.71■■□□□ 1.23
HDAC6-208ENST00000438518 IGHDP01880 384 aa22.7■■□□□ 1.22
HDAC6-208ENST00000438518 GPSM2P81274 684 aa22.7■■□□□ 1.22
HDAC6-208ENST00000438518 PUM3Q15397 648 aaKnown RBP22.7■■□□□ 1.22
HDAC6-208ENST00000438518 RHPN1Q8TCX5 695 aa22.7■■□□□ 1.22
HDAC6-208ENST00000438518 VPS33BQ9H267 617 aa22.7■■□□□ 1.22
HDAC6-208ENST00000438518 LTBP3Q9NS15 1303 aa22.7■■□□□ 1.22
HDAC6-208ENST00000438518 KCNJ4P48050 445 aa22.69■■□□□ 1.22
HDAC6-208ENST00000438518 CENPQQ7L2Z9 268 aaPredicted RBP22.69■■□□□ 1.22
HDAC6-208ENST00000438518 LPIN2Q92539 896 aa22.69■■□□□ 1.22
HDAC6-208ENST00000438518 EYA3Q99504 573 aa22.69■■□□□ 1.22
HDAC6-208ENST00000438518 ZBTB47Q9UFB7 747 aaPredicted RBP22.69■■□□□ 1.22
HDAC6-208ENST00000438518 ZNF609O15014 1411 aa22.68■■□□□ 1.22
HDAC6-208ENST00000438518 SRCAPQ6ZRS2 3230 aa22.68■■□□□ 1.22
HDAC6-208ENST00000438518 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
HDAC6-208ENST00000438518 GRIN3BO60391 1043 aa22.68■■□□□ 1.22
HDAC6-208ENST00000438518 FKBP4Q02790 459 aaKnown RBP eCLIP22.68■■□□□ 1.22
HDAC6-208ENST00000438518 TFCP2Q12800 502 aa22.68■■□□□ 1.22
HDAC6-208ENST00000438518 CLASRPQ8N2M8 674 aaKnown RBP22.68■■□□□ 1.22
HDAC6-208ENST00000438518 MED23Q9ULK4 1368 aa22.67■■□□□ 1.22
HDAC6-208ENST00000438518 C15orf52Q6ZUT6 534 aaKnown RBP22.67■■□□□ 1.22
HDAC6-208ENST00000438518 TBC1D16Q8TBP0 767 aa22.67■■□□□ 1.22
HDAC6-208ENST00000438518 TAOK3Q9H2K8 898 aa22.67■■□□□ 1.22
HDAC6-208ENST00000438518 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
HDAC6-208ENST00000438518 KDM2BQ8NHM5 1336 aa22.66■■□□□ 1.22
HDAC6-208ENST00000438518 TAF5LO75529 589 aa22.66■■□□□ 1.22
HDAC6-208ENST00000438518 UFL1O94874 794 aa22.66■■□□□ 1.22
HDAC6-208ENST00000438518 IFIT1P09914 478 aaKnown RBP22.66■■□□□ 1.22
HDAC6-208ENST00000438518 SLC5A1P13866 664 aa22.66■■□□□ 1.22
HDAC6-208ENST00000438518 FGFR2P21802 821 aa22.66■■□□□ 1.22
HDAC6-208ENST00000438518 ATP2B3Q16720 1220 aa22.66■■□□□ 1.22
HDAC6-208ENST00000438518 DCAF8L1A6NGE4 600 aa22.65■■□□□ 1.22
HDAC6-208ENST00000438518 GPR162Q16538 588 aa22.65■■□□□ 1.22
HDAC6-208ENST00000438518 OLFM4Q6UX06 510 aa22.65■■□□□ 1.22
HDAC6-208ENST00000438518 HELBQ8NG08 1087 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-208ENST00000438518 WWC3Q9ULE0 1092 aa22.65■■□□□ 1.22
HDAC6-208ENST00000438518 A0A1B0GUL7 405 aa22.64■■□□□ 1.21
HDAC6-208ENST00000438518 C6orf229H3BNL8 230 aa22.64■■□□□ 1.21
HDAC6-208ENST00000438518 TNNI3KQ59H18 835 aa22.64■■□□□ 1.21
HDAC6-208ENST00000438518 POLLQ9UGP5 575 aa22.64■■□□□ 1.21
HDAC6-208ENST00000438518 FPGT-TNNI3KV9GXZ4 949 aa22.64■■□□□ 1.21
HDAC6-208ENST00000438518 YBX3P16989 372 aaKnown RBP eCLIP22.63■■□□□ 1.21
HDAC6-208ENST00000438518 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
HDAC6-208ENST00000438518 APBB1O00213 710 aa22.62■■□□□ 1.21
HDAC6-208ENST00000438518 NUCB1Q02818 461 aa22.62■■□□□ 1.21
HDAC6-208ENST00000438518 ANKRD45Q5TZF3 282 aa22.62■■□□□ 1.21
HDAC6-208ENST00000438518 ZC3H12CQ9C0D7 883 aaKnown RBP22.62■■□□□ 1.21
HDAC6-208ENST00000438518 DICER1Q9UPY3 1922 aaKnown RBP22.61■■□□□ 1.21
HDAC6-208ENST00000438518 GOLGB1Q14789 3259 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms