RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 DDR1Q08345 913 aa13.31□□□□□ -0.28
ERGIC3-207ENST00000438317 CUL4AQ13619 759 aa13.31□□□□□ -0.28
ERGIC3-207ENST00000438317 RABL6Q3YEC7 729 aaPredicted RBP13.31□□□□□ -0.28
ERGIC3-207ENST00000438317 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
ERGIC3-207ENST00000438317 PA2G4Q9UQ80 394 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-207ENST00000438317 H7C1W4 665 aa13.3□□□□□ -0.28
ERGIC3-207ENST00000438317 CYP2E1P05181 493 aaPredicted RBP13.3□□□□□ -0.28
ERGIC3-207ENST00000438317 TMX3Q96JJ7 454 aa13.3□□□□□ -0.28
ERGIC3-207ENST00000438317 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
ERGIC3-207ENST00000438317 RAD50Q92878 1312 aa13.3□□□□□ -0.28
ERGIC3-207ENST00000438317 A0A087WZG4 1122 aa13.29□□□□□ -0.28
ERGIC3-207ENST00000438317 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
ERGIC3-207ENST00000438317 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
ERGIC3-207ENST00000438317 EAF2Q96CJ1 260 aaPredicted RBP13.29□□□□□ -0.28
ERGIC3-207ENST00000438317 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
ERGIC3-207ENST00000438317 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 BAG4O95429 457 aaKnown RBP13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 MAP4K4O95819 1239 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 RFX5P48382 616 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 RASSF7Q02833 373 aa13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 KCNB2Q92953 911 aa13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 CWC25Q9NXE8 425 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-207ENST00000438317 GLTPD2A6NH11 291 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 VEGFAP15692 232 aaPredicted RBP13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 ATP5JP18859 108 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 TM4SF1P30408 202 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 CASP7P55210 303 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 GPR108Q9NPR9 543 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 PALD1Q9ULE6 856 aa13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 ZC3H4Q9UPT8 1303 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-207ENST00000438317 FSD2A1L4K1 749 aa13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 POTECB2RU33 542 aa13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 PTPN12Q05209 780 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 TRIM28Q13263 835 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 SNX14Q9Y5W7 946 aa13.26□□□□□ -0.29
ERGIC3-207ENST00000438317 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
ERGIC3-207ENST00000438317 ZKSCAN1P17029 563 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-207ENST00000438317 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
ERGIC3-207ENST00000438317 ZSCAN31Q96LW9 406 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-207ENST00000438317 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
ERGIC3-207ENST00000438317 RFX7Q2KHR2 1363 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 STARD3NLO95772 234 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 A1BGP04217 495 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 LMNB1P20700 586 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 PSMA5P28066 241 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 MRE11P49959 708 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 FOXO4P98177 505 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 TNNI3KQ59H18 835 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 MAP4K1Q92918 833 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 SIL1Q9H173 461 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 FPGT-TNNI3KV9GXZ4 949 aa13.24□□□□□ -0.29
ERGIC3-207ENST00000438317 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 ZGPATQ8N5A5 531 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 TTC14Q96N46 770 aa13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-207ENST00000438317 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 CIAO1O76071 339 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 SLC34A2O95436 690 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 PIP4K2AP48426 406 aaPredicted RBP13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 TFCP2Q12800 502 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 IL25Q9H293 177 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 BOLA2Q9H3K6 86 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 CCDC88AQ3V6T2 1871 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 TJP1Q07157 1748 aa13.22□□□□□ -0.29
ERGIC3-207ENST00000438317 BRD1O95696 1058 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 KCNJ4P48050 445 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 MCTP1Q6DN14 999 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms