RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 FAM187AA6NFU0 413 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 PHKG2P15735 406 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 NFE2L2Q16236 605 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 MARCH10Q8NA82 808 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 ZNF511Q8NB15 262 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 PHACTR3Q96KR7 559 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 PLEKHF1Q96S99 279 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 LRRC37A3O60309 1634 aa8.02□□□□□ -1.13
ECHDC1-208ENST00000436638 CYP27B1O15528 508 aa8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 RIPK4P57078 832 aa8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 AGERQ15109 404 aa8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 TMEM259Q4ZIN3 620 aa8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 FAM182BQ5T319 152 aa8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 ARMC2Q8NEN0 867 aa8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 SYTL4Q96C24 671 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-208ENST00000436638 MAP3K5Q99683 1374 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 APAF1O14727 1248 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 RNMTO43148 476 aaKnown RBP8□□□□□ -1.13
ECHDC1-208ENST00000436638 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
ECHDC1-208ENST00000436638 CABP4P57796 275 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 TEFQ10587 303 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 NR6A1Q15406 480 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 MPRIPQ6WCQ1 1025 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 SNIP1Q8TAD8 396 aaKnown RBP8□□□□□ -1.13
ECHDC1-208ENST00000436638 ACSBG1Q96GR2 724 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 DCAF5Q96JK2 942 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
ECHDC1-208ENST00000436638 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
ECHDC1-208ENST00000436638 DGAT1O75907 488 aa7.99□□□□□ -1.13
ECHDC1-208ENST00000436638 USP17L8P0C7I0 530 aa7.99□□□□□ -1.13
ECHDC1-208ENST00000436638 TRAF7Q6Q0C0 670 aa7.99□□□□□ -1.13
ECHDC1-208ENST00000436638 PKD1L3Q7Z443 1732 aa7.99□□□□□ -1.13
ECHDC1-208ENST00000436638 TMOD3Q9NYL9 352 aa7.99□□□□□ -1.13
ECHDC1-208ENST00000436638 ERVV-2B6SEH9 535 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 TRIM37O94972 964 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 CALD1Q05682 793 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 GLIPR1L2Q4G1C9 344 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 FOXJ1Q92949 421 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 PSMD1Q99460 953 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 BRWD3Q6RI45 1802 aa7.98□□□□□ -1.13
ECHDC1-208ENST00000436638 BCL9O00512 1426 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 SENP3-EIF4A1A0A087X0R7 540 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 J3QL48 77 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 APBA3O96018 575 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 ALDH1A1P00352 501 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 DCTN1Q14203 1278 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 NBPF14Q5TI25 921 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 ILDR2Q71H61 639 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 MCM10Q7L590 875 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 SLC52A2Q9HAB3 445 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 LGR6Q9HBX8 967 aa7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 HMX1Q9NP08 348 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-208ENST00000436638 KCNQ2O43526 872 aa7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 VARSP26640 1264 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 BAG6P46379 1132 aa7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 BPHLQ86WA6 291 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 TTC5Q8N0Z6 440 aa7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 NFATC2IPQ8NCF5 419 aa7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 IL17REQ8NFR9 667 aa7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 EPS8L1Q8TE68 723 aa7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 SMARCC1Q92922 1105 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-208ENST00000436638 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 SHANK3Q9BYB0 1731 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 A0A0U1RQG5 324 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 BTBD11A6QL63 1104 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 SIAH2O43255 324 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 NCLP19338 710 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 HMGB2P26583 209 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 TAF7Q15545 349 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 PIGBQ92521 554 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 THUMPD2Q9BTF0 503 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 FKBPLQ9UIM3 349 aa7.95□□□□□ -1.14
ECHDC1-208ENST00000436638 KAT6BQ8WYB5 2073 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 MAGEB6P1A0A0J9YX57 407 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 SMPD1P17405 629 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 ARID5BQ14865 1188 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 PNMA1Q8ND90 353 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 FAM174AQ8TBP5 190 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 TLL2Q9Y6L7 1015 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 WASF2Q9Y6W5 498 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 DOT1LQ8TEK3 1739 aa7.94□□□□□ -1.14
ECHDC1-208ENST00000436638 LCE2BO14633 110 aa7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 GNAI1P63096 354 aa7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 C4orf48Q5BLP8 95 aa7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 WDR63Q8IWG1 891 aa7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 GPKOWQ92917 476 aaPredicted RBP eCLIP7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 TSPYL4Q9UJ04 414 aa7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 CEMIPQ8WUJ3 1361 aa7.93□□□□□ -1.14
ECHDC1-208ENST00000436638 NHSQ6T4R5 1651 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms